| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is purP [H]
Identifier: 113969295
GI number: 113969295
Start: 1113020
End: 1114309
Strand: Direct
Name: purP [H]
Synonym: Shewmr4_0951
Alternate gene names: 113969295
Gene position: 1113020-1114309 (Clockwise)
Preceding gene: 113969294
Following gene: 113969296
Centisome position: 23.65
GC content: 49.46
Gene sequence:
>1290_bases ATGTTAGAAAAGCTGTTCAAACTGAAACAAAATCAAACGAGCCTCAAGCAGGAAGCGATAGCAGGTTTGACAACATTTAT GACTATGGCCTACATCATTTTTGTGAATCCAATGATGTTAGCCGATGCGGGTATGGATCATGGCGCCGTGTTTGTGGCCA CCTGTTTAGCGGCGGCGGTGGGATGTATTGTGATGGGTGTGATGGCGAACTACCCCATTGCACTGGCCCCTGGTATGGGA CTCAATGCTTTTTTTACCTACACAGTAGTGGGTGAGATGGGTTATAGCTGGGAAACTGCACTTGGTGCTGTTTTCCTGTC GGGAATTTGCTTTTTAATCCTGTCTCTAGTGCGTATTCGCGAGTGGATTGTGAACAGCATTCCTATGTCGCTGCGTATCG GTATTGCTGCGGGTATTGGCTTATTCCTCGCGCTGATCGGTCTTAAGAGTGCTGGCATTGTGGTCGCAAGTCCTGCAACT TTAGTGACTATGGGCGATATTACCGCTTTCCCGGCGGTGATGGCCGTGTTAGGTTTCTTCCTGATCATCGCCATGGTGCA ACGTGGAATGAAATCGGCGGTGATTTTAAGCATCCTTATCATTACTGGGCTTGGGTTACTCTTCGGTGATGTGCATTACA ACGGTATCGTCTCTATGCCGCCTTCTGTCGCGCCGACCTTTATGGCGATGGATTTATCCCAAGTATTTGAAGTAACAATG CTATCCGTGGTGTTTGCCTTCCTATTTGTCGATCTCTTTGATACTTCGGGCACCTTAGTTGCGGTTGCGCAGCGCGGTGG TTTCCTCGATGAAAAAGGCCGTTTACCTCGCTTAAACCGTGCCTTAACCGCCGACAGTTTAGCGACGATTGCGGGCGCTG CATTCGGTACGTCAACCACCACTAGTTATATCGAAAGTACCGCTGGGGTGAGCGCGGGCGGCCGTACTGGCTTAACCGCT GTCGTTGTCGGCTTACTGTTCATCTTGGCCTTATTCTTATCACCATTAGCTGGAATGATCCCCGCCTATGCTACGGCTGG TACCTTGTTCTATGTGGCGATTCTAATGATGGCTGGACTGGTTCACGTTGAATGGGAAGACTTAACTGAGGCTGCACCTG TGGTTGTGGTGTGTATCCTGATGCCGCTGACCTTCTCAATTGCCACAGGGATTGCGCTGGGGATTATTTCCTATGCTGTC ATCAAGCTGTTAACGGGCCGCTTTAGCGATTTAAATATCGGCGTGCTGGTGCTCGCTGCCATGTTTATTGCGAAATTTAT TTACGGCTGA
Upstream 100 bases:
>100_bases TGACCAGCACAAACTCCCTATAATCCCCTGCGAAAAACACGACTACATAGTGTTTACATTTTTGACCCTACCTACTTAAA AAGAAAAGGAACCCAGTTCC
Downstream 100 bases:
>100_bases TACTGAGCTAGTCGTCCATTCGCGGGCTATTTTTTGAGGGGCATCTAATCGATGGCCCTTTTTTATGCGCGATCCCAAGC AGAATTGAAAATTTCTACCA
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAVGCIVMGVMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT LVTMGDITAFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLLFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAAFGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMAGLVHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAV IKLLTGRFSDLNIGVLVLAAMFIAKFIYG
Sequences:
>Translated_429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAVGCIVMGVMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT LVTMGDITAFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLLFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAAFGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMAGLVHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAV IKLLTGRFSDLNIGVLVLAAMFIAKFIYG >Mature_429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAVGCIVMGVMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT LVTMGDITAFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLLFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAAFGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMAGLVHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAV IKLLTGRFSDLNIGVLVLAAMFIAKFIYG
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=52.5700934579439, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI87082309, Length=426, Percent_Identity=50, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1790499, Length=425, Percent_Identity=38.3529411764706, Blast_Score=283, Evalue=1e-77, Organism=Escherichia coli, GI48994909, Length=435, Percent_Identity=37.9310344827586, Blast_Score=265, Evalue=6e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45034; Mature: 45034
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCIVMGVMANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPATLVTMGDITAFPAVMAVLGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHH LIIAMVQRGMKSAVILSILIITGLGLLFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAAFGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH TSYIESTAGVSAGGRTGLTAVVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMAGL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAVIKLLTGRFSDLNIGVLVLAA HEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH MFIAKFIYG HHHHHHHCC >Mature Secondary Structure MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCIVMGVMANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPATLVTMGDITAFPAVMAVLGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHH LIIAMVQRGMKSAVILSILIITGLGLLFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAAFGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH TSYIESTAGVSAGGRTGLTAVVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMAGL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAVIKLLTGRFSDLNIGVLVLAA HEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH MFIAKFIYG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]