| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is bolA [H]
Identifier: 113969276
GI number: 113969276
Start: 1089098
End: 1089418
Strand: Direct
Name: bolA [H]
Synonym: Shewmr4_0932
Alternate gene names: 113969276
Gene position: 1089098-1089418 (Clockwise)
Preceding gene: 113969275
Following gene: 113969277
Centisome position: 23.14
GC content: 45.79
Gene sequence:
>321_bases ATGTCCAATACCCATGCGCAGGGCACAGTGGCACAGACCATTGATAAGAAGCTGACCGAAAGCTTCTCGCCAACTCATTT AGAAGTCCTTAACGAAAGCCATCGTCACCATGTTCCGCCAAATTCAGAGACTCACTTTAAAGTGGTTGTCGTCAGTGATG AATTTGAAGGCCTTCGCTTACTTGCCCGCCATCGTTTGGTAAACAATTGTTTAGCCGATGAATTAGCAAACGGTGTGCAT GCACTTTCTATCCATACCTTCACTCAGAGTGAATGGGCTAAGGATGTTGAAGTGCCTAAAACGCCAAATTGTCGCGGTTA A
Upstream 100 bases:
>100_bases TGGCTCAGTTTAAAGCCGCAAAGCTGACGTTGGGATTTGATCTTTTGTACTTGAAGCAGTACTCTGCGGCCACTGGATTT TCCCATGTTGAGATTTGAAT
Downstream 100 bases:
>100_bases TTGCGCCCCTGATTTTATAAAAGCCACGTTATCAACGTGGCTTTTTTGTTTTAGGTCAAATTGAGGAAATTATTGGGTTT CCCTCCCTAACTTTATGTGT
Product: transcriptional regulator BolA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSNTHAQGTVAQTIDKKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFEGLRLLARHRLVNNCLADELANGVH ALSIHTFTQSEWAKDVEVPKTPNCRG
Sequences:
>Translated_106_residues MSNTHAQGTVAQTIDKKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFEGLRLLARHRLVNNCLADELANGVH ALSIHTFTQSEWAKDVEVPKTPNCRG >Mature_105_residues SNTHAQGTVAQTIDKKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFEGLRLLARHRLVNNCLADELANGVHA LSIHTFTQSEWAKDVEVPKTPNCRG
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=105, Percent_Identity=48.5714285714286, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI87081740, Length=99, Percent_Identity=50.5050505050505, Blast_Score=103, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17541430, Length=104, Percent_Identity=51.9230769230769, Blast_Score=106, Evalue=3e-24, Organism=Drosophila melanogaster, GI221459039, Length=101, Percent_Identity=41.5841584158416, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 11858; Mature: 11727
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTHAQGTVAQTIDKKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFEGLRL CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHH LARHRLVNNCLADELANGVHALSIHTFTQSEWAKDVEVPKTPNCRG HHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNTHAQGTVAQTIDKKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFEGLRL CCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHH LARHRLVNNCLADELANGVHALSIHTFTQSEWAKDVEVPKTPNCRG HHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]