| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is 113969253
Identifier: 113969253
GI number: 113969253
Start: 1060649
End: 1061740
Strand: Direct
Name: 113969253
Synonym: Shewmr4_0909
Alternate gene names: NA
Gene position: 1060649-1061740 (Clockwise)
Preceding gene: 113969245
Following gene: 113969254
Centisome position: 22.54
GC content: 50.82
Gene sequence:
>1092_bases ATGCCAGCTATAATAAAGCAATTTTTCTATAAGAGCCATGAAATGACCTTATCCGACTCGAGATTTATTTCCCTTAATCA GTGGCTGAACCGTTATTTTTCCTATGATGTGACCCCGATTCTGATTTCCGGTGACGCCAGTTTTAGGCGCTATTTCCGGG TCACGGACCGCGATGCGAGCTACATTGTTGCCGATTCGCCGCCCGCCTTAGTGCCTATCGCACCTTTTATCGCCCTCGCC AGTGCCTATGCGGCGGCGGGACTGACAGTTCCAAAAGTCATCGCCTCCGATGCCGAGCAAGGCTTTATGCTTCTGAGCGA TCTTGGGGATACTCAGTTGTTGTCTGTGCTGACCGATGCGAATGTGGCTGACTACTATCGCCGCGCCTTGGCATTATTGC CTCAGGTGGCCTCAGTGGTTGAGAGCCTTGACCCTGTCACTGGCAGCACGCAGCCATTGCCTTTATATGATGAGGCGTTT GTGCGCCGTGAGCTGGGGATTTTTACCGAGTGGCTGTTAGAGAGACATTTACAGCTTGAACTTAGCCATGAGGAACGCTC ACTGGTAGAGCAGAGTTTTGACCTCTTGGTGGAAAATGCCCTCGCACAACCTAAGGTGGGGATGCACCGCGATTACCACA GCCGTAACTTGATGCTCAAAGAGGGCGAGCTGTGCGTGATTGATTTTCAAGATGCGGTGCTAGGGCCTGTGACCTACGAT GCAGTGTCATTACTGCGGGATTGCTATGTGCGTTGGCCGCAAACCATGGTGCAGGAATTAATGCAGCAGCATTATCAACA AGTGCTTGAGTTGGGGCAAATCCCGGCGCAGACATCTTTTATCCAGTATCAAACCTGGTTTGATTTAATGGGGCTGCAGC GCCATATCAAGGCGGCGGGGATTTTTGCGCGTTTACACTATCGTGATAACAAGCCCGCCTATATGGCCGATATTCCGTTA ACCTTGTCGTATATTGTGGATATTGCCAACCTTTATCCAGCGCTCACACCATTTTCCGCTTGGGTGCAATCGCGCATAGT GCCTGCGTTTATGGCCAAGGGAAAAGATACTCAGCAGGGAGACAAGCAATGA
Upstream 100 bases:
>100_bases ATGATTTCTTTGTCTGGACAAGTATCGACGGGGAAAGTTGCAAACTACAAGTGCAACGCAGCAAATAAATCTCTCAATTT CTTAGCTGTTTCCAAATTAT
Downstream 100 bases:
>100_bases AGGCCATGATCCTAGCCGCAGGTAGGGGAGAGCGTTTACGCCCTTTGACCGACACCCTACCCAAACCTTTAGTGCCCGTC TTAGGTAAACCGCTGATTGT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Phosphotransferase; Phosphotransferase Related Ser/Thr Protein Kinase; Phosphotransferase Family; Chlorosome Protein; Phosphotransferase Family Protein; .5 Kda Chlorosome Protein; Bifunctional ATPase/Phosphotransferase; P-Loop Hydrolase; Two-Component Fusion Protein; Putatuive Aminoglycoside Phosphotransferase; Ser/Thr Kinase-Like Phosphotransferase; ATPase; Serine/Threonine Protein Kinase; Ser/Thr Protein Kinase-Like Phosphotransferase; P-Loop Hydrolase/Phosphotransferase; Phosphotransferase Protein
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MPAIIKQFFYKSHEMTLSDSRFISLNQWLNRYFSYDVTPILISGDASFRRYFRVTDRDASYIVADSPPALVPIAPFIALA SAYAAAGLTVPKVIASDAEQGFMLLSDLGDTQLLSVLTDANVADYYRRALALLPQVASVVESLDPVTGSTQPLPLYDEAF VRRELGIFTEWLLERHLQLELSHEERSLVEQSFDLLVENALAQPKVGMHRDYHSRNLMLKEGELCVIDFQDAVLGPVTYD AVSLLRDCYVRWPQTMVQELMQQHYQQVLELGQIPAQTSFIQYQTWFDLMGLQRHIKAAGIFARLHYRDNKPAYMADIPL TLSYIVDIANLYPALTPFSAWVQSRIVPAFMAKGKDTQQGDKQ
Sequences:
>Translated_363_residues MPAIIKQFFYKSHEMTLSDSRFISLNQWLNRYFSYDVTPILISGDASFRRYFRVTDRDASYIVADSPPALVPIAPFIALA SAYAAAGLTVPKVIASDAEQGFMLLSDLGDTQLLSVLTDANVADYYRRALALLPQVASVVESLDPVTGSTQPLPLYDEAF VRRELGIFTEWLLERHLQLELSHEERSLVEQSFDLLVENALAQPKVGMHRDYHSRNLMLKEGELCVIDFQDAVLGPVTYD AVSLLRDCYVRWPQTMVQELMQQHYQQVLELGQIPAQTSFIQYQTWFDLMGLQRHIKAAGIFARLHYRDNKPAYMADIPL TLSYIVDIANLYPALTPFSAWVQSRIVPAFMAKGKDTQQGDKQ >Mature_362_residues PAIIKQFFYKSHEMTLSDSRFISLNQWLNRYFSYDVTPILISGDASFRRYFRVTDRDASYIVADSPPALVPIAPFIALAS AYAAAGLTVPKVIASDAEQGFMLLSDLGDTQLLSVLTDANVADYYRRALALLPQVASVVESLDPVTGSTQPLPLYDEAFV RRELGIFTEWLLERHLQLELSHEERSLVEQSFDLLVENALAQPKVGMHRDYHSRNLMLKEGELCVIDFQDAVLGPVTYDA VSLLRDCYVRWPQTMVQELMQQHYQQVLELGQIPAQTSFIQYQTWFDLMGLQRHIKAAGIFARLHYRDNKPAYMADIPLT LSYIVDIANLYPALTPFSAWVQSRIVPAFMAKGKDTQQGDKQ
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41198; Mature: 41066
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIIKQFFYKSHEMTLSDSRFISLNQWLNRYFSYDVTPILISGDASFRRYFRVTDRDAS CCHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHCCCCCEEEEECCHHHHHHEEEECCCCC YIVADSPPALVPIAPFIALASAYAAAGLTVPKVIASDAEQGFMLLSDLGDTQLLSVLTDA EEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEHHHCCCCHHHHHHHHCC NVADYYRRALALLPQVASVVESLDPVTGSTQPLPLYDEAFVRRELGIFTEWLLERHLQLE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE LSHEERSLVEQSFDLLVENALAQPKVGMHRDYHSRNLMLKEGELCVIDFQDAVLGPVTYD ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHCCCHHHH AVSLLRDCYVRWPQTMVQELMQQHYQQVLELGQIPAQTSFIQYQTWFDLMGLQRHIKAAG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IFARLHYRDNKPAYMADIPLTLSYIVDIANLYPALTPFSAWVQSRIVPAFMAKGKDTQQG HHEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC DKQ CCC >Mature Secondary Structure PAIIKQFFYKSHEMTLSDSRFISLNQWLNRYFSYDVTPILISGDASFRRYFRVTDRDAS CHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHCCCCCEEEEECCHHHHHHEEEECCCCC YIVADSPPALVPIAPFIALASAYAAAGLTVPKVIASDAEQGFMLLSDLGDTQLLSVLTDA EEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEHHHCCCCHHHHHHHHCC NVADYYRRALALLPQVASVVESLDPVTGSTQPLPLYDEAFVRRELGIFTEWLLERHLQLE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE LSHEERSLVEQSFDLLVENALAQPKVGMHRDYHSRNLMLKEGELCVIDFQDAVLGPVTYD ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHCCCHHHH AVSLLRDCYVRWPQTMVQELMQQHYQQVLELGQIPAQTSFIQYQTWFDLMGLQRHIKAAG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IFARLHYRDNKPAYMADIPLTLSYIVDIANLYPALTPFSAWVQSRIVPAFMAKGKDTQQG HHEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC DKQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA