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The map label for this gene is yjjP [H]

Identifier: 113969242

GI number: 113969242

Start: 1048894

End: 1049655

Strand: Direct

Name: yjjP [H]

Synonym: Shewmr4_0898

Alternate gene names: 113969242

Gene position: 1048894-1049655 (Clockwise)

Preceding gene: 113969241

Following gene: 113969243

Centisome position: 22.29

GC content: 51.05

Gene sequence:

>762_bases
GTGTACGCAGATACTCAAAATGATATTACTCGGCAGGTTGTGCGTGTCGCACAACTGCTACTGGCCTACGGCGCTGAATC
TGATTTAGTTGAAGAAATCAGCCAGCGCCTAGGTCAGGCCTTAGGATTGGCAAGTGTTGAGCTTTCCATCTCCTCTAATT
CCCTCGTGTTAACCAGTTTAGTGCATGGTCGCTGTATCACGACGACGCGTCGGATCCGCGAGCATGGCATCAATATGACC
ATAGTCTGCGAGTTGCAACGCATCTGTTTGTTGGCGGAAAAAGGTCTCTATGGCCCCAACGAAGTGCGTAAACGCTTAGC
GCGGATTGAACCTAAGACCTATCCGCCGTATCTCGTGATATTGATGATAGGCCTGTCCTGCGCCAGTTTTTGTCACCTAT
TTAATGGCGATATTGCCGCATCAGTTATCACCTTTTTTGCCTCCGCGGTCGGGATGTCGGTGCGCCTTGCGATTGCCAAG
CGGCATTTTAATTTGCTGGTCAATTTTGCGGTGACGGCATTTGTCACTAGTATGTTGGCGCAGACGGGTTATGTATTTCA
CTTGAGCGAAACCCCGCAGGCGGCCATGGCGGCCAGTGTGTTGATGCTGGTGCCGGGTTTCCCGATGATCAATGCAATTT
CTGATATGGTCAAAGGCCATATGAACGTGGGCATTTCCCGTTGGGGCCATGCCACCTTGCTCACAGTGTCATCCGTTATC
GGCATCACCATTGCGATGCAGATTGGGGGGATCTTCCTATGA

Upstream 100 bases:

>100_bases
AGACTATGACGATGAATTTGACGATGACTTTGATGATGACGACTACGATGTAGAAGTGATCTACCAAAGATAATATCCCA
ACCTAAGTTTTGAGAGTCCC

Downstream 100 bases:

>100_bases
TCGCCTTACTGTGGACGCTGTTGCACGATGCCTTTTTCTCGGCGATTCCCGCAGTGGGCTTTGCTATGGTGTTTAACGTG
CCGAAACGTTTCTTACCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMT
IVCELQRICLLAEKGLYGPNEVRKRLARIEPKTYPPYLVILMIGLSCASFCHLFNGDIAASVITFFASAVGMSVRLAIAK
RHFNLLVNFAVTAFVTSMLAQTGYVFHLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
GITIAMQIGGIFL

Sequences:

>Translated_253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMT
IVCELQRICLLAEKGLYGPNEVRKRLARIEPKTYPPYLVILMIGLSCASFCHLFNGDIAASVITFFASAVGMSVRLAIAK
RHFNLLVNFAVTAFVTSMLAQTGYVFHLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
GITIAMQIGGIFL
>Mature_253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMT
IVCELQRICLLAEKGLYGPNEVRKRLARIEPKTYPPYLVILMIGLSCASFCHLFNGDIAASVITFFASAVGMSVRLAIAK
RHFNLLVNFAVTAFVTSMLAQTGYVFHLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
GITIAMQIGGIFL

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=254, Percent_Identity=48.8188976377953, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27456; Mature: 27456

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEECCCCEEEHHH
VHGRCITTTRRIREHGINMTIVCELQRICLLAEKGLYGPNEVRKRLARIEPKTYPPYLVI
HCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
LMIGLSCASFCHLFNGDIAASVITFFASAVGMSVRLAIAKRHFNLLVNFAVTAFVTSMLA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTGYVFHLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
HCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
GITIAMQIGGIFL
HHHHHHHHCCCCC
>Mature Secondary Structure
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEECCCCEEEHHH
VHGRCITTTRRIREHGINMTIVCELQRICLLAEKGLYGPNEVRKRLARIEPKTYPPYLVI
HCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
LMIGLSCASFCHLFNGDIAASVITFFASAVGMSVRLAIAKRHFNLLVNFAVTAFVTSMLA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTGYVFHLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
HCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
GITIAMQIGGIFL
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]