| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is btuR [H]
Identifier: 113969190
GI number: 113969190
Start: 1001537
End: 1002172
Strand: Direct
Name: btuR [H]
Synonym: Shewmr4_0846
Alternate gene names: 113969190
Gene position: 1001537-1002172 (Clockwise)
Preceding gene: 113969189
Following gene: 113969191
Centisome position: 21.28
GC content: 54.09
Gene sequence:
>636_bases ATGACAGCAGAGAACGAAAAACAGCTCGACACCGAACAAGCGCAAATCAAGGCTGAACGCCATAAGGCGCGCCAGCAAAA AGTGAAGGCGGGTGTGGACGCTAAAATTGCCGCCGCCCAAGAAGAAAAAGGCATTCTGCTGGTGCTCACAGGCAATGGCA AAGGCAAGTCGACCTCAGGTTTTGGCACGGTTGCCCGCGCAGTGGGTCACGGCAAAAAAGCCGCGGTAGTGCAATTTATC AAGGGCACATGGGAATGCGGTGAGCGTAATCTGCTTGAAGGTGCGGGCGTGGCATTTCATGTGATGGGCACCGGATTTAC CTGGGAAACCCAAGACAGAGAAAAGGACACTGCCGCCGCTCTCGTGGCGTGGGATGCCGCCGAAGCCTTGCTTCAAGACG AAAGTATTGATTGTGTGATGCTCGATGAACTGACCTATATGGTGAGTTACCATTACCTCGATGTGGAGCGGGTGCTCACG GCGCTGAAAAACCGTCCGCCGATGCAGCATGTGATTATCACTGGCCGTGCTTGCCACCGCGCGATTATCGAACTGGCGGA TACGGTTAGCGAAGTGCAGCCGATTAAACATGCCTTCGAAGCAGGCATTAAAGCGCAGCCGGGATTCGACTATTAA
Upstream 100 bases:
>100_bases CTGGATCGTTTGGCCGATGTATTAGCCGAGCATCTCGATATGCAAAAACTTGCGTCCATTATAAATGCATAAGAATTAGC AGTAGGAAGAACAGAAGATC
Downstream 100 bases:
>100_bases ACAGTGCGGCTTAGGCGGATTGGTTACACCGCGAGCCGCCCTTTAAACCCCATTAGGGCTGTTGTTCCTCGGTAAAATCC GTTAGCGTCACTATGGTTAG
Product: cob(I)yrinic acid a,c-diamide adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; Corrinoid adenosyltransferase [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTAENEKQLDTEQAQIKAERHKARQQKVKAGVDAKIAAAQEEKGILLVLTGNGKGKSTSGFGTVARAVGHGKKAAVVQFI KGTWECGERNLLEGAGVAFHVMGTGFTWETQDREKDTAAALVAWDAAEALLQDESIDCVMLDELTYMVSYHYLDVERVLT ALKNRPPMQHVIITGRACHRAIIELADTVSEVQPIKHAFEAGIKAQPGFDY
Sequences:
>Translated_211_residues MTAENEKQLDTEQAQIKAERHKARQQKVKAGVDAKIAAAQEEKGILLVLTGNGKGKSTSGFGTVARAVGHGKKAAVVQFI KGTWECGERNLLEGAGVAFHVMGTGFTWETQDREKDTAAALVAWDAAEALLQDESIDCVMLDELTYMVSYHYLDVERVLT ALKNRPPMQHVIITGRACHRAIIELADTVSEVQPIKHAFEAGIKAQPGFDY >Mature_210_residues TAENEKQLDTEQAQIKAERHKARQQKVKAGVDAKIAAAQEEKGILLVLTGNGKGKSTSGFGTVARAVGHGKKAAVVQFIK GTWECGERNLLEGAGVAFHVMGTGFTWETQDREKDTAAALVAWDAAEALLQDESIDCVMLDELTYMVSYHYLDVERVLTA LKNRPPMQHVIITGRACHRAIIELADTVSEVQPIKHAFEAGIKAQPGFDY
Specific function: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids [H]
COG id: COG2109
COG function: function code H; ATP:corrinoid adenosyltransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787525, Length=193, Percent_Identity=65.2849740932643, Blast_Score=269, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003724 [H]
Pfam domain/function: PF02572 CobA_CobO_BtuR [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 23033; Mature: 22902
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAENEKQLDTEQAQIKAERHKARQQKVKAGVDAKIAAAQEEKGILLVLTGNGKGKSTSG CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCC FGTVARAVGHGKKAAVVQFIKGTWECGERNLLEGAGVAFHVMGTGFTWETQDREKDTAAA HHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEEECCEEECCCCCCHHHHHH LVAWDAAEALLQDESIDCVMLDELTYMVSYHYLDVERVLTALKNRPPMQHVIITGRACHR HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHH AIIELADTVSEVQPIKHAFEAGIKAQPGFDY HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TAENEKQLDTEQAQIKAERHKARQQKVKAGVDAKIAAAQEEKGILLVLTGNGKGKSTSG CCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCC FGTVARAVGHGKKAAVVQFIKGTWECGERNLLEGAGVAFHVMGTGFTWETQDREKDTAAA HHHHHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEEECCEEECCCCCCHHHHHH LVAWDAAEALLQDESIDCVMLDELTYMVSYHYLDVERVLTALKNRPPMQHVIITGRACHR HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHH AIIELADTVSEVQPIKHAFEAGIKAQPGFDY HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]