| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969124
Identifier: 113969124
GI number: 113969124
Start: 907976
End: 908524
Strand: Direct
Name: 113969124
Synonym: Shewmr4_0780
Alternate gene names: NA
Gene position: 907976-908524 (Clockwise)
Preceding gene: 113969123
Following gene: 113969127
Centisome position: 19.29
GC content: 47.54
Gene sequence:
>549_bases GTGCTTAAACTGACAGGGATAAAAAACCACAACCGCCGACTTCGCCTCTGGCATGTGATTGCCATAGTGCTGGTGTTAGT CGGCATAGGTTTGGGCGCCTATGCGATGACGTTTAACAGCAAACAGTTAAATTTGAGTTGCCGCGCCAAGTTGTATGAGG CGCCTTTTAAGGCGGAGTCTTTTCCCACGTACAGCCAAAGTTTGGCACTGGATGTGAAGATTGCGGCTAATCACGCCAAG TTAAGTTACCGCTATGGGCAGAATGGCCAGGATATCGCCGCCTTGATTTATGAGGGAAGAGTCAGCGCCTTAGCGCCTGG CACTATGACCTATAAGCTCAACTTAGATCAGGCCAATTTAAAAATGGATTTGTTGCAAACCGAGGTACCGGAGTTAATGC GTGCGGAAGTGCAAAAATCCCGTAAGGCCTTATTTGAGCAGGGTGGAATGAGTTTTGATATGCAGATTGTGGACATGGAA CCCTTAAACAATTACGTGCTGATCAAGTTTTATCCCAGCGGTCATTTGTGGGCTTGCCAGAGCAAATAG
Upstream 100 bases:
>100_bases AAGGATGCCGATGGCTTAAATTTCGAAACCATCAAAATGATGTCGGAAAACTTCAATGTCGATGTGATTGATGAGTTATG GCTAAAAAGAGTGGGGATCT
Downstream 100 bases:
>100_bases CATTATTAAGACGTAGAAAAGGCATCCAATTGGATGCCTTTTTTTGGGCGCGATGATGGGATTACTGCGGTGAGACTTGG ACTAATGTCAGTCCATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLKLTGIKNHNRRLRLWHVIAIVLVLVGIGLGAYAMTFNSKQLNLSCRAKLYEAPFKAESFPTYSQSLALDVKIAANHAK LSYRYGQNGQDIAALIYEGRVSALAPGTMTYKLNLDQANLKMDLLQTEVPELMRAEVQKSRKALFEQGGMSFDMQIVDME PLNNYVLIKFYPSGHLWACQSK
Sequences:
>Translated_182_residues MLKLTGIKNHNRRLRLWHVIAIVLVLVGIGLGAYAMTFNSKQLNLSCRAKLYEAPFKAESFPTYSQSLALDVKIAANHAK LSYRYGQNGQDIAALIYEGRVSALAPGTMTYKLNLDQANLKMDLLQTEVPELMRAEVQKSRKALFEQGGMSFDMQIVDME PLNNYVLIKFYPSGHLWACQSK >Mature_182_residues MLKLTGIKNHNRRLRLWHVIAIVLVLVGIGLGAYAMTFNSKQLNLSCRAKLYEAPFKAESFPTYSQSLALDVKIAANHAK LSYRYGQNGQDIAALIYEGRVSALAPGTMTYKLNLDQANLKMDLLQTEVPELMRAEVQKSRKALFEQGGMSFDMQIVDME PLNNYVLIKFYPSGHLWACQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20501; Mature: 20501
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLTGIKNHNRRLRLWHVIAIVLVLVGIGLGAYAMTFNSKQLNLSCRAKLYEAPFKAES CEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEECCCCCCCC FPTYSQSLALDVKIAANHAKLSYRYGQNGQDIAALIYEGRVSALAPGTMTYKLNLDQANL CCCCCCCEEEEEEEEECCEEEEEEECCCCCCEEEEEEECCEEEECCCEEEEEEECCCCCC KMDLLQTEVPELMRAEVQKSRKALFEQGGMSFDMQIVDMEPLNNYVLIKFYPSGHLWACQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEC SK CC >Mature Secondary Structure MLKLTGIKNHNRRLRLWHVIAIVLVLVGIGLGAYAMTFNSKQLNLSCRAKLYEAPFKAES CEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEECCCCCCCC FPTYSQSLALDVKIAANHAKLSYRYGQNGQDIAALIYEGRVSALAPGTMTYKLNLDQANL CCCCCCCEEEEEEEEECCEEEEEEECCCCCCEEEEEEECCEEEECCCEEEEEEECCCCCC KMDLLQTEVPELMRAEVQKSRKALFEQGGMSFDMQIVDMEPLNNYVLIKFYPSGHLWACQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEC SK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA