| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969123
Identifier: 113969123
GI number: 113969123
Start: 907234
End: 907983
Strand: Direct
Name: 113969123
Synonym: Shewmr4_0779
Alternate gene names: NA
Gene position: 907234-907983 (Clockwise)
Preceding gene: 113969122
Following gene: 113969124
Centisome position: 19.28
GC content: 48.8
Gene sequence:
>750_bases ATGCAAATAGGCACTTGTTGGTTTAGTGCACAGGAACAAGTGCTGGTCGATGCAGCCTCAGGACGTAGCTGGTTATTGAG TGCGGATGAATTCCAAGCGCTTTCACTCTTGAGTGCGCAGCGTGGCAAAGTGGTCTCACGCATGGAGTTGCTGCAATCGA TTACGCCCCATCTTAAGTTATCGATGCGCGCCGATGACTTGCTCAATAGTACTATTCGCCGCTTACGGTTATTTCTCGGT GACGACGCCGCTCATCTGTTGGTGAGTATCGCCAATCAAGGCTATATCCTTTACGCCACGCCCCGAAAACATTCACGTAC CGCGCTGAACTCGCCTCTGTTCAAACTGAGTATGCCGCAGTTTATGCTGCTTACCCTTATGACCCTAGCTATGTTGTTGT GGGTAGGCTCTCATATCACGCATCCCACTAGCATTGCGCCGAATTATGCGAAGCAGTTGCCGACGCACGATGGGCATTAT TCGGAAATTCAATTCTATACAGGTCAGCCGTCGGACCATTCGATGCGGCCCTTAGTCGACCATTTTGTCGAACAAGTGTC GGCTTGTGCGGTGTTTCCGTGGCAATCCATTGCGGCGACTATTTCGACGGATCAAAGGTTTGTGAGTCTTGTGCTGAAGA ATAAGGATGCCGATGGCTTAAATTTCGAAACCATCAAAATGATGTCGGAAAACTTCAATGTCGATGTGATTGATGAGTTA TGGCTAAAAAGAGTGGGGATCTGTGCTTAA
Upstream 100 bases:
>100_bases AGATTATTCATCTGGTTCTGTTAGGTGGCGTTAAGAATACTGCGCTGTTTTCGTTCAAATTGTATACTCGGCCCCACATC AAATAGTGAAAGGGGCCGAG
Downstream 100 bases:
>100_bases ACTGACAGGGATAAAAAACCACAACCGCCGACTTCGCCTCTGGCATGTGATTGCCATAGTGCTGGTGTTAGTCGGCATAG GTTTGGGCGCCTATGCGATG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator-Related Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MQIGTCWFSAQEQVLVDAASGRSWLLSADEFQALSLLSAQRGKVVSRMELLQSITPHLKLSMRADDLLNSTIRRLRLFLG DDAAHLLVSIANQGYILYATPRKHSRTALNSPLFKLSMPQFMLLTLMTLAMLLWVGSHITHPTSIAPNYAKQLPTHDGHY SEIQFYTGQPSDHSMRPLVDHFVEQVSACAVFPWQSIAATISTDQRFVSLVLKNKDADGLNFETIKMMSENFNVDVIDEL WLKRVGICA
Sequences:
>Translated_249_residues MQIGTCWFSAQEQVLVDAASGRSWLLSADEFQALSLLSAQRGKVVSRMELLQSITPHLKLSMRADDLLNSTIRRLRLFLG DDAAHLLVSIANQGYILYATPRKHSRTALNSPLFKLSMPQFMLLTLMTLAMLLWVGSHITHPTSIAPNYAKQLPTHDGHY SEIQFYTGQPSDHSMRPLVDHFVEQVSACAVFPWQSIAATISTDQRFVSLVLKNKDADGLNFETIKMMSENFNVDVIDEL WLKRVGICA >Mature_249_residues MQIGTCWFSAQEQVLVDAASGRSWLLSADEFQALSLLSAQRGKVVSRMELLQSITPHLKLSMRADDLLNSTIRRLRLFLG DDAAHLLVSIANQGYILYATPRKHSRTALNSPLFKLSMPQFMLLTLMTLAMLLWVGSHITHPTSIAPNYAKQLPTHDGHY SEIQFYTGQPSDHSMRPLVDHFVEQVSACAVFPWQSIAATISTDQRFVSLVLKNKDADGLNFETIKMMSENFNVDVIDEL WLKRVGICA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27964; Mature: 27964
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIGTCWFSAQEQVLVDAASGRSWLLSADEFQALSLLSAQRGKVVSRMELLQSITPHLKL CCCCEEECCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE SMRADDLLNSTIRRLRLFLGDDAAHLLVSIANQGYILYATPRKHSRTALNSPLFKLSMPQ ECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEECCHH FMLLTLMTLAMLLWVGSHITHPTSIAPNYAKQLPTHDGHYSEIQFYTGQPSDHSMRPLVD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH HFVEQVSACAVFPWQSIAATISTDQRFVSLVLKNKDADGLNFETIKMMSENFNVDVIDEL HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEHHHHH WLKRVGICA HHHHHCCCC >Mature Secondary Structure MQIGTCWFSAQEQVLVDAASGRSWLLSADEFQALSLLSAQRGKVVSRMELLQSITPHLKL CCCCEEECCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE SMRADDLLNSTIRRLRLFLGDDAAHLLVSIANQGYILYATPRKHSRTALNSPLFKLSMPQ ECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCEECCHH FMLLTLMTLAMLLWVGSHITHPTSIAPNYAKQLPTHDGHYSEIQFYTGQPSDHSMRPLVD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH HFVEQVSACAVFPWQSIAATISTDQRFVSLVLKNKDADGLNFETIKMMSENFNVDVIDEL HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEHHHHH WLKRVGICA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA