Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113968985

Identifier: 113968985

GI number: 113968985

Start: 746233

End: 747141

Strand: Direct

Name: 113968985

Synonym: Shewmr4_0641

Alternate gene names: NA

Gene position: 746233-747141 (Clockwise)

Preceding gene: 113968984

Following gene: 113968986

Centisome position: 15.86

GC content: 49.06

Gene sequence:

>909_bases
ATGGCTCGCCTAGGTAAGCAGCAGTTGCAACTCTTGGAGGGCGTTTACCTTAATCGCTCTCCAAGGGTGAAACTCAGCCC
GAATTGGCGGACGATTTACCGCGAGTTAGAAGTGGGCGAGCTGGATGGCGCGGAAAAATATTTGTGCTTTGCGCCGCGGG
ATTTTGAGTTGCTGCGCCAGGGCGTGTTAGCAAAAGAGGGCGTCGATTTACAGGCTCTGGACTTTAATCTAGACCGTATC
GCCATGTCCGCCCAAAGCCAAAATGAAAAGCTGGCGAGTATCCGCCCAGAAGCCGAGTATGTTTTGTTGAAGTATCTCGG
TTTTGAATCGCCTCCTATGGGAATGTCTACGCGTTCTTCGTTACGCACTCCCTTAGATGAAGCAGAGCAGCTTTGCCATG
ATCTTTATGTTAAAGCCATCTTAGTGATTGAAAACCTAGATATATTCGATGCAATAACTCAAGCGCGCTTACCGGCCGAA
CTTAGCCGCATTATGGTGATTTACCGTGGTAGTGGCCACCATTCCCCCATTGGTGTGCGGCATTTTTTGCAGGCAATGGC
GGGTAAAATGCCGATCATTGCCTTTACCGATCTCGATCCCGCAGGGCTGCAAATTGCCCATACCTTAACGGGCATGACCC
ATTGTATCGTGCCGCAGTTAGCGCTTGTCGCGCCCAGCGAGTTACTCGCTATCCCACAGATTAATTCCGCTGATGACTTT
GCCAAGCAAGCGCCTCAGGCCAAATATTTACAGTCAACCGACTTAAAAAATTGGCAGCAATTGAGTCTTTGGTTAAATCA
GCAACGCATTAGCATTAAACAGCAGCACCTGCTAGTGCATCGGCTTGAGCTAGTGCTACTGGCATATGATGAGTCGTTAT
CCATCCCCATCTATCTACAAATACCTTAA

Upstream 100 bases:

>100_bases
AAGGCTTACCCGATGAGCATAAGGCTTACTTCGAGTTAGAACCCTTAGGTGAACCGCACCCCATCTACAGCGGTAACTTT
ATTATCCGCGACGTGGAATT

Downstream 100 bases:

>100_bases
TTAATAGTTTTAAATTCTGATTAATTTATTTATTTGGTTTTTAAATCTGGCTTTATTCAAGCTGAATCGATTAATTGTGT
TTATTTGGTTTAAATACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRQGVLAKEGVDLQALDFNLDRI
AMSAQSQNEKLASIRPEAEYVLLKYLGFESPPMGMSTRSSLRTPLDEAEQLCHDLYVKAILVIENLDIFDAITQARLPAE
LSRIMVIYRGSGHHSPIGVRHFLQAMAGKMPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALVAPSELLAIPQINSADDF
AKQAPQAKYLQSTDLKNWQQLSLWLNQQRISIKQQHLLVHRLELVLLAYDESLSIPIYLQIP

Sequences:

>Translated_302_residues
MARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRQGVLAKEGVDLQALDFNLDRI
AMSAQSQNEKLASIRPEAEYVLLKYLGFESPPMGMSTRSSLRTPLDEAEQLCHDLYVKAILVIENLDIFDAITQARLPAE
LSRIMVIYRGSGHHSPIGVRHFLQAMAGKMPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALVAPSELLAIPQINSADDF
AKQAPQAKYLQSTDLKNWQQLSLWLNQQRISIKQQHLLVHRLELVLLAYDESLSIPIYLQIP
>Mature_301_residues
ARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRQGVLAKEGVDLQALDFNLDRIA
MSAQSQNEKLASIRPEAEYVLLKYLGFESPPMGMSTRSSLRTPLDEAEQLCHDLYVKAILVIENLDIFDAITQARLPAEL
SRIMVIYRGSGHHSPIGVRHFLQAMAGKMPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALVAPSELLAIPQINSADDFA
KQAPQAKYLQSTDLKNWQQLSLWLNQQRISIKQQHLLVHRLELVLLAYDESLSIPIYLQIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34075; Mature: 33944

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRQ
CCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH
GVLAKEGVDLQALDFNLDRIAMSAQSQNEKLASIRPEAEYVLLKYLGFESPPMGMSTRSS
CCHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHH
LRTPLDEAEQLCHDLYVKAILVIENLDIFDAITQARLPAELSRIMVIYRGSGHHSPIGVR
HCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCHHHHEEEEEEEECCCCCCCHHHH
HFLQAMAGKMPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALVAPSELLAIPQINSADDF
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHH
AKQAPQAKYLQSTDLKNWQQLSLWLNQQRISIKQQHLLVHRLELVLLAYDESLSIPIYLQ
HHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEE
IP
CC
>Mature Secondary Structure 
ARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRQ
CCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH
GVLAKEGVDLQALDFNLDRIAMSAQSQNEKLASIRPEAEYVLLKYLGFESPPMGMSTRSS
CCHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHH
LRTPLDEAEQLCHDLYVKAILVIENLDIFDAITQARLPAELSRIMVIYRGSGHHSPIGVR
HCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCHHHHEEEEEEEECCCCCCCHHHH
HFLQAMAGKMPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALVAPSELLAIPQINSADDF
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHH
AKQAPQAKYLQSTDLKNWQQLSLWLNQQRISIKQQHLLVHRLELVLLAYDESLSIPIYLQ
HHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEE
IP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA