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The map label for this gene is cirA [C]

Identifier: 113968966

GI number: 113968966

Start: 717869

End: 719875

Strand: Direct

Name: cirA [C]

Synonym: Shewmr4_0622

Alternate gene names: 113968966

Gene position: 717869-719875 (Clockwise)

Preceding gene: 113968965

Following gene: 113968967

Centisome position: 15.25

GC content: 51.72

Gene sequence:

>2007_bases
GTGCTGTATCAACCTATCAAATTAGCCGTTATTTTAGCGGGAGTGCTGGGCACCGCTGTACCTCAATTAGGCTGGTCTTC
TGAGGCGAGCGATTGTGGTGAAGATAAAAAATGTCAGGATTATCTAAGAGTATCTGGCGATGTAATGCGCCAGCCTGTCC
ATCTAGTGAGCGATCCTAAACAGAACCGTTTGCCATTGCCTGCCTACGATGGCTCGGGATTTTTACGCTCTATCCCTGGA
TTTAATATCACCCGCAAAGGCGGTTCAGGTGGCGACCCTATGTTTAGGGGGCTGGGCGGCTCGCGCTTAAACATAGTCGA
TGATGCTCAGCATGTGTATGGCGCCTGTGGTGGACGTATGGACCCACCGACAAACTATATTTATCCCGAAAGCTACGATC
AGATAACGGTAATCAAAGGGCCACAGACGGTGAAGTACGGCCCTGTCGGCACTGCGGGCACAATTCTATTTGAGAAAAAC
CGCCATCGCTTTAACCAAGCGGATCTTGAAGGACGGGCCAGCGCTACGGGCGGCAGTTTCGATAGGCGAGATGCCATGGT
GGAGCTGAGCGCTGGGGATAAGAATTACTACCTTGATTTCGATATGAATCAATCCAGTAGTGATCATTATGAAGATGGAA
ATGGCAACAAAGTACAATCGAGTTACGATCGGCAAAACGCCAATCTTGCCTTGGGGTGGACACCGACAGAGCGCACTGTA
CTTGAACTGGCCTACGGTGAGTCGAGCGGCGAAGCCGAGTATGCCGACAGGTTAAACAAGGCGCGTCAAATCGATAACCG
TGATGCGGCGCTACTGCTACAACACGAGTTTGAATCGAGTTGGTTAACGGCGGTCGAATTGCAAGCCTTTAGCAATAAAA
ACGACCACATTATGGATAGGTTCGATGAAGGGGTTAATTCAGGTGCCAATGTGCGGCGGATGACGGAGGGCGGCCATTTG
TGGTTCGAGTTAGCGCCACTCGATGCTCTGGATGTGACTCTTGGGCTGGATTATATGTCGAGCAAACACGATGGTCGCAG
CATGGCGCCCGGCGATGTCGGCTTAGACGACTTACTCAATAAACCCTTTAAAGAGGATATGCGCTATCAAAACTATGGGC
TGTTTGCTGAGTCCCGCTATCGTTTTGAAGCGAGTGACCTAGGCAGCAGTAGCTTGCACGCTGGATTGAGGCTAGACGAC
TGGAATAGCGAGCTCTTGATTGCTCAGCAGGGCGAGCGGGACGATACCCTCTACAGCGGATACCTGCGTTATGAGTTTCA
AACCGCGCAGCACCAATATTATGCAGGCTTTGGCTCGGCGCAGCGGATGCCGGATTATTGGGAGATTATGAAGGCTAGCG
CCGATAACCCCGCACAAAAAGCCTTTGACCTGAAAGCGGAAACCACCAATCAGTTCGATATAGGTTGGATTTATCAGGGG
CCTGTCGAGGCTTCGGTGTCACTCTTCTATGGTGAGATTGCGGACTATATTCTGATTGATTCCAGCGGCCAAGCCACCCT
TGCCCGTAATATTGATGCGAGTCTCTACGGTGGTGAGGCCAGTCTAGATTATGCGCTGAATGAGCAGTGGTCGAGCCAAC
TCACGGTGAGTTATACCCATGGCGAAAACGATACCGACAAGGTGGCGCTTGGGCAAATATCGCCGTTAGAGGCCAGATTA
ACCGTTAACTACCAATGGCAACGTTGGACCATGGCGGCGCAGTGGCGAGTGGTGGCCGCGCAAGACCGCTACACCTTAGG
CCATGGCAATATCGTGGGGCAAGACTTAGGCACGAGCAGCGGTTTTGGTACCTTGGCGCTCAATGCTTCTTGGTCGTATA
ACAAGGATTTATCCTTAATTTTGGGTGTCGAAAACCTGTTTGATACCGCCTATGCCGAGCATGTGAGTAAGGCGGGCACG
GGGAACGATCTGCCGGGCAGTGAGGCCATGTTTAGGGTCAACGAGCCGGGCCGTAATCTATGGGCCAAGCTGACCTATCA
GTTCTAA

Upstream 100 bases:

>100_bases
GACAGATTGTCGCGCCCAGCCGAGTTTTGATTGCGCTTCCTTAGCCAGTAACAACAATACCCCCACAAAAATCATTAAAA
ACAATATGTAGGGGAATATC

Downstream 100 bases:

>100_bases
CTCGGCTTATTTGTACTATTGGCGCCCCGAGAGTCTTGCTGTCGGGGCGATGCTATTTTTAGCAAGCCAATGCCAAACTG
CGACGTATCAAAGCTAAGGC

Product: TonB-dependent copper receptor

Products: NA

Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein; Outer Membrane Protein OprC; Outer-Membrane Heme Receptor; Heme Receptor HutR; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Hemin Receptor; NB-Dependent Heme Receptor HutR; Outer Membrane Protein OprC Complement; NB System Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Proteins

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MLYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCQDYLRVSGDVMRQPVHLVSDPKQNRLPLPAYDGSGFLRSIPG
FNITRKGGSGGDPMFRGLGGSRLNIVDDAQHVYGACGGRMDPPTNYIYPESYDQITVIKGPQTVKYGPVGTAGTILFEKN
RHRFNQADLEGRASATGGSFDRRDAMVELSAGDKNYYLDFDMNQSSSDHYEDGNGNKVQSSYDRQNANLALGWTPTERTV
LELAYGESSGEAEYADRLNKARQIDNRDAALLLQHEFESSWLTAVELQAFSNKNDHIMDRFDEGVNSGANVRRMTEGGHL
WFELAPLDALDVTLGLDYMSSKHDGRSMAPGDVGLDDLLNKPFKEDMRYQNYGLFAESRYRFEASDLGSSSLHAGLRLDD
WNSELLIAQQGERDDTLYSGYLRYEFQTAQHQYYAGFGSAQRMPDYWEIMKASADNPAQKAFDLKAETTNQFDIGWIYQG
PVEASVSLFYGEIADYILIDSSGQATLARNIDASLYGGEASLDYALNEQWSSQLTVSYTHGENDTDKVALGQISPLEARL
TVNYQWQRWTMAAQWRVVAAQDRYTLGHGNIVGQDLGTSSGFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGT
GNDLPGSEAMFRVNEPGRNLWAKLTYQF

Sequences:

>Translated_668_residues
MLYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCQDYLRVSGDVMRQPVHLVSDPKQNRLPLPAYDGSGFLRSIPG
FNITRKGGSGGDPMFRGLGGSRLNIVDDAQHVYGACGGRMDPPTNYIYPESYDQITVIKGPQTVKYGPVGTAGTILFEKN
RHRFNQADLEGRASATGGSFDRRDAMVELSAGDKNYYLDFDMNQSSSDHYEDGNGNKVQSSYDRQNANLALGWTPTERTV
LELAYGESSGEAEYADRLNKARQIDNRDAALLLQHEFESSWLTAVELQAFSNKNDHIMDRFDEGVNSGANVRRMTEGGHL
WFELAPLDALDVTLGLDYMSSKHDGRSMAPGDVGLDDLLNKPFKEDMRYQNYGLFAESRYRFEASDLGSSSLHAGLRLDD
WNSELLIAQQGERDDTLYSGYLRYEFQTAQHQYYAGFGSAQRMPDYWEIMKASADNPAQKAFDLKAETTNQFDIGWIYQG
PVEASVSLFYGEIADYILIDSSGQATLARNIDASLYGGEASLDYALNEQWSSQLTVSYTHGENDTDKVALGQISPLEARL
TVNYQWQRWTMAAQWRVVAAQDRYTLGHGNIVGQDLGTSSGFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGT
GNDLPGSEAMFRVNEPGRNLWAKLTYQF
>Mature_668_residues
MLYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCQDYLRVSGDVMRQPVHLVSDPKQNRLPLPAYDGSGFLRSIPG
FNITRKGGSGGDPMFRGLGGSRLNIVDDAQHVYGACGGRMDPPTNYIYPESYDQITVIKGPQTVKYGPVGTAGTILFEKN
RHRFNQADLEGRASATGGSFDRRDAMVELSAGDKNYYLDFDMNQSSSDHYEDGNGNKVQSSYDRQNANLALGWTPTERTV
LELAYGESSGEAEYADRLNKARQIDNRDAALLLQHEFESSWLTAVELQAFSNKNDHIMDRFDEGVNSGANVRRMTEGGHL
WFELAPLDALDVTLGLDYMSSKHDGRSMAPGDVGLDDLLNKPFKEDMRYQNYGLFAESRYRFEASDLGSSSLHAGLRLDD
WNSELLIAQQGERDDTLYSGYLRYEFQTAQHQYYAGFGSAQRMPDYWEIMKASADNPAQKAFDLKAETTNQFDIGWIYQG
PVEASVSLFYGEIADYILIDSSGQATLARNIDASLYGGEASLDYALNEQWSSQLTVSYTHGENDTDKVALGQISPLEARL
TVNYQWQRWTMAAQWRVVAAQDRYTLGHGNIVGQDLGTSSGFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGT
GNDLPGSEAMFRVNEPGRNLWAKLTYQF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74081; Mature: 74081

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCQDYLRVSGDVMRQPVHLVSDPK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHCCCC
QNRLPLPAYDGSGFLRSIPGFNITRKGGSGGDPMFRGLGGSRLNIVDDAQHVYGACGGRM
CCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHHCCCCCEEEEECCHHHHHHHCCCCC
DPPTNYIYPESYDQITVIKGPQTVKYGPVGTAGTILFEKNRHRFNQADLEGRASATGGSF
CCCCCEECCCCCCEEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
DRRDAMVELSAGDKNYYLDFDMNQSSSDHYEDGNGNKVQSSYDRQNANLALGWTPTERTV
CCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE
LELAYGESSGEAEYADRLNKARQIDNRDAALLLQHEFESSWLTAVELQAFSNKNDHIMDR
EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCHHHHH
FDEGVNSGANVRRMTEGGHLWFELAPLDALDVTLGLDYMSSKHDGRSMAPGDVGLDDLLN
HHHHCCCCCCEEEEECCCEEEEEECCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHHC
KPFKEDMRYQNYGLFAESRYRFEASDLGSSSLHAGLRLDDWNSELLIAQQGERDDTLYSG
CCHHHHHCCCCCCCEECCEEEEEHHHCCCCHHCCCCEEECCCCEEEEEECCCCCCCEEEE
YLRYEFQTAQHQYYAGFGSAQRMPDYWEIMKASADNPAQKAFDLKAETTNQFDIGWIYQG
EEEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHEEEECCCCCCEEEEEEEEC
PVEASVSLFYGEIADYILIDSSGQATLARNIDASLYGGEASLDYALNEQWSSQLTVSYTH
CCCHHHHHEECCCCCEEEEECCCCEEEEECCCCEEECCCCEEEHHHCCCCCCCEEEEEEC
GENDTDKVALGQISPLEARLTVNYQWQRWTMAAQWRVVAAQDRYTLGHGNIVGQDLGTSS
CCCCCCCEEECCCCCCEEEEEEEEEEEEEEEEEEEEEEEECCCEEECCCCEEECCCCCCC
GFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGNDLPGSEAMFRVNEPGRNL
CCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCE
WAKLTYQF
EEEEEECC
>Mature Secondary Structure
MLYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCQDYLRVSGDVMRQPVHLVSDPK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHCCCC
QNRLPLPAYDGSGFLRSIPGFNITRKGGSGGDPMFRGLGGSRLNIVDDAQHVYGACGGRM
CCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHHCCCCCEEEEECCHHHHHHHCCCCC
DPPTNYIYPESYDQITVIKGPQTVKYGPVGTAGTILFEKNRHRFNQADLEGRASATGGSF
CCCCCEECCCCCCEEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
DRRDAMVELSAGDKNYYLDFDMNQSSSDHYEDGNGNKVQSSYDRQNANLALGWTPTERTV
CCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE
LELAYGESSGEAEYADRLNKARQIDNRDAALLLQHEFESSWLTAVELQAFSNKNDHIMDR
EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCHHHHH
FDEGVNSGANVRRMTEGGHLWFELAPLDALDVTLGLDYMSSKHDGRSMAPGDVGLDDLLN
HHHHCCCCCCEEEEECCCEEEEEECCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHHC
KPFKEDMRYQNYGLFAESRYRFEASDLGSSSLHAGLRLDDWNSELLIAQQGERDDTLYSG
CCHHHHHCCCCCCCEECCEEEEEHHHCCCCHHCCCCEEECCCCEEEEEECCCCCCCEEEE
YLRYEFQTAQHQYYAGFGSAQRMPDYWEIMKASADNPAQKAFDLKAETTNQFDIGWIYQG
EEEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHEEEECCCCCCEEEEEEEEC
PVEASVSLFYGEIADYILIDSSGQATLARNIDASLYGGEASLDYALNEQWSSQLTVSYTH
CCCHHHHHEECCCCCEEEEECCCCEEEEECCCCEEECCCCEEEHHHCCCCCCCEEEEEEC
GENDTDKVALGQISPLEARLTVNYQWQRWTMAAQWRVVAAQDRYTLGHGNIVGQDLGTSS
CCCCCCCEEECCCCCCEEEEEEEEEEEEEEEEEEEEEEEECCCEEECCCCEEECCCCCCC
GFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGNDLPGSEAMFRVNEPGRNL
CCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCE
WAKLTYQF
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA