| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is mlhB [H]
Identifier: 113968954
GI number: 113968954
Start: 704211
End: 705122
Strand: Direct
Name: mlhB [H]
Synonym: Shewmr4_0610
Alternate gene names: 113968954
Gene position: 704211-705122 (Clockwise)
Preceding gene: 113968953
Following gene: 113968955
Centisome position: 14.96
GC content: 50.22
Gene sequence:
>912_bases ATGCCAAGCTGGCAAGCATCTGTATTAAATACTATTTTATCCTATGTGGCACGGCCATCCATCAGCCGTGGTAAAGCCAA GCTCCCCCTAAATCAAGTGAGACAACGCTTATTAGAGCTGGATAAGCGCTGGTTGCCGTGGCCCGAAAAACTCGTTACGG CCTCGATTACCTTACAACATTCTACCCTGTTGCATTATGTGCTGCTGAATGACACGCCGCGTTTGGGCAACCTGTTTTAC ATTCGTGGCGGCGGATTTTGTTTTAAAACTCCCCATGCCCACGCAAGACTGGTGGCCGATATCAGTGAACGTTGTCGCCT CGATACGTTTATCCCAGATTATCGTTTAGCGCCGGAGCATCCGTATCCCGCGCCCTGTGACGATGTGCTCGAGGCTTATC TGCACTTAATTGAGTTGAAAGGCAGCGATAATCTGGTGTTGATGGGCGATTCTGCCGGCGGCAATTTAGCCTTGAGTCTG TTGCTCGAACTGAAAAAGCGCCATCTGCCTATGCCTAAAGCCTGTGTGTTGTTGTCACCCGCACTCGATTTAGCCATTAC CGGCGATACCGAGCTGATTTTAGGGGCGGACGATCCGTTCTTTACCATTGAGTCGCTTTTGCGGCTGCGCGGCGCTTATC TTGCCGGGGCGAATCCTATGTCTGAACGGGTTTCACCTTTACAGGGGAACTTGGCTGACTTGCCGCCACTCTTAGTGATT GCCGGTACGCGCGAGTTGCTTTTACAAGATTCAGAACGACTGGTTATGCAAATTAAGGCCTGTGGTGGTGCGGTAGAATC GCGTTTTTATCACAACATGCCCCATGTTTTTCCCCTGTTCCATCTGTTGCCAGAAGCGATTGAGGCGAGGGAACAAATTG CAGATTTTGTGCTTTCACAGCTGATTCGTTAA
Upstream 100 bases:
>100_bases CTGCGCCTAAAAGCACAGAATTATCGGAAGTTGGATCTGCTGTGATCTGCACGCCGTTCCCATCGGTGTCCTATTGCGGC ACTGATGTGGAGGACGGGAA
Downstream 100 bases:
>100_bases AATTGTGTAGTTATTCATATTCAGTGAATAGCTAGCAAAAATAGGGGTAAATAACTTTTTTTCTGACTAAATATGCTAAA GGCCTCTGGCGTAAACGCTT
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASITLQHSTLLHYVLLNDTPRLGNLFY IRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEHPYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSL LLELKKRHLPMPKACVLLSPALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGANPMSERVSPLQGNLADLPPLLVI AGTRELLLQDSERLVMQIKACGGAVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQLIR
Sequences:
>Translated_303_residues MPSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASITLQHSTLLHYVLLNDTPRLGNLFY IRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEHPYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSL LLELKKRHLPMPKACVLLSPALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGANPMSERVSPLQGNLADLPPLLVI AGTRELLLQDSERLVMQIKACGGAVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQLIR >Mature_302_residues PSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASITLQHSTLLHYVLLNDTPRLGNLFYI RGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEHPYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSLL LELKKRHLPMPKACVLLSPALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGANPMSERVSPLQGNLADLPPLLVIA GTRELLLQDSERLVMQIKACGGAVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQLIR
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 33774; Mature: 33643
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASITLQH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEH STLLHYVLLNDTPRLGNLFYIRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEH HHHEEEEEECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSLLLELKKRHLPMPKACVLLSP CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEECC ALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGANPMSERVSPLQGNLADLPPLLVI CCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEE AGTRELLLQDSERLVMQIKACGGAVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQ ECCHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC >Mature Secondary Structure PSWQASVLNTILSYVARPSISRGKAKLPLNQVRQRLLELDKRWLPWPEKLVTASITLQH CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEH STLLHYVLLNDTPRLGNLFYIRGGGFCFKTPHAHARLVADISERCRLDTFIPDYRLAPEH HHHEEEEEECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYPAPCDDVLEAYLHLIELKGSDNLVLMGDSAGGNLALSLLLELKKRHLPMPKACVLLSP CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEECC ALDLAITGDTELILGADDPFFTIESLLRLRGAYLAGANPMSERVSPLQGNLADLPPLLVI CCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEE AGTRELLLQDSERLVMQIKACGGAVESRFYHNMPHVFPLFHLLPEAIEAREQIADFVLSQ ECCHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA