| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968903
Identifier: 113968903
GI number: 113968903
Start: 641888
End: 642751
Strand: Direct
Name: 113968903
Synonym: Shewmr4_0559
Alternate gene names: NA
Gene position: 641888-642751 (Clockwise)
Preceding gene: 113968901
Following gene: 113968905
Centisome position: 13.64
GC content: 49.65
Gene sequence:
>864_bases TTGAATAATGCATATTGTGTTGAATTGAACGCGATGCCCTCGCTGTTTTCTCTTTATCGCAAGATTTTCTTTGGCCGTAA ACCTGGTTGGGATCAACAGCCGCTGCCTTATATCAAGGTGTCGGCGCCCAATGTGCAAGTGTCCGAGGCCAAAGTTAGCC AATATGCCCAAGTGTGTGGCTTTAATTTCGACGGTAAATTATTACCGCCAACCTATTTGTATGTGATGGCATTTCGTCTG CACGCGGTGATTTTTACCCACGATGGTATTACCTTCCCGCTGCTGGGGATGATCCATTTAAAGAACCGTATTCAAGTCTA TCGTCCGACGACAGTCGATGAAGTGTTCTCCCTCGAATGCGCGTTAACCACCAGCCGTGAAACCGATTCAGGCTTAGAGT TTGAATTTGTCTCTAAGGCCTTTGTGGGCGAAGAGCTGGTGTGGGAATCGCTGTCGACTTACCTCTATCGTATCGAGACC GCGGGTCGTCGCGTTCGTCCTCCTAAGGCGCTTGAGATGGCTTGGGATTCACCCCAATCATGGGAATTGAGTGAAGATTT AGGTCGTCGTTATGCCAAAGCATCAGGCGACTATAACCTGATCCACCTGCATCCTGTGCTGTCCAAACGTTTCGGTTTTG ACCGTGTGCTGGCCCACGGTATGTGGTCTAAGGCGCGCTGCTTAGCGGAATTAATGCCTGAGATTGGTGAACGCCCCTTT GTGGTCGATGTGGCCTTTAAGCTGCCGTTACTGATGCCCGCAGAAGTGGGATTTGGTTACGAAACATCACAAGACAAGTG GGTGTTCGAGCTACGTGACAGTAAAGGTCGCAGGCCACATCTCAGTGGTGAAGTGCAGCTTTAA
Upstream 100 bases:
>100_bases TTTACACTCGTGAGTTTTTTGATTTTCAGATGTTCTGCATCTGGACGGGGTATTTCTGGTTATTCGTGCGTAGGGATAGT TAATTAAAAGGTACTCAGAC
Downstream 100 bases:
>100_bases GCATGATGAGTAACGGCGCCTAAGGCGCCGTTTTTGTTGGTGTTGTTTGCAGTGCTAAGGCACGCTGTGTCCGGTTGATG CTTGCCAGATACTAAACCAT
Product: dehydratase
Products: NA
Alternate protein names: MaoC Domain Protein Dehydratase; MaoC-Like Dehydratase; Acyl Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Domain-Containing Protein; MaoC Like Domain-Containing Protein; MaoC-Like Domain-Containing Protein; MaoC-Like Protein; MaoC-Like Domain Protein; Enoyl-CoA Hydratase; Maoc Domain Protein Dehydratase; Dehydrogenase; Maoc Domain Protein; Conserved Hypothethical Protein MaoC Domain Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNNAYCVELNAMPSLFSLYRKIFFGRKPGWDQQPLPYIKVSAPNVQVSEAKVSQYAQVCGFNFDGKLLPPTYLYVMAFRL HAVIFTHDGITFPLLGMIHLKNRIQVYRPTTVDEVFSLECALTTSRETDSGLEFEFVSKAFVGEELVWESLSTYLYRIET AGRRVRPPKALEMAWDSPQSWELSEDLGRRYAKASGDYNLIHLHPVLSKRFGFDRVLAHGMWSKARCLAELMPEIGERPF VVDVAFKLPLLMPAEVGFGYETSQDKWVFELRDSKGRRPHLSGEVQL
Sequences:
>Translated_287_residues MNNAYCVELNAMPSLFSLYRKIFFGRKPGWDQQPLPYIKVSAPNVQVSEAKVSQYAQVCGFNFDGKLLPPTYLYVMAFRL HAVIFTHDGITFPLLGMIHLKNRIQVYRPTTVDEVFSLECALTTSRETDSGLEFEFVSKAFVGEELVWESLSTYLYRIET AGRRVRPPKALEMAWDSPQSWELSEDLGRRYAKASGDYNLIHLHPVLSKRFGFDRVLAHGMWSKARCLAELMPEIGERPF VVDVAFKLPLLMPAEVGFGYETSQDKWVFELRDSKGRRPHLSGEVQL >Mature_287_residues MNNAYCVELNAMPSLFSLYRKIFFGRKPGWDQQPLPYIKVSAPNVQVSEAKVSQYAQVCGFNFDGKLLPPTYLYVMAFRL HAVIFTHDGITFPLLGMIHLKNRIQVYRPTTVDEVFSLECALTTSRETDSGLEFEFVSKAFVGEELVWESLSTYLYRIET AGRRVRPPKALEMAWDSPQSWELSEDLGRRYAKASGDYNLIHLHPVLSKRFGFDRVLAHGMWSKARCLAELMPEIGERPF VVDVAFKLPLLMPAEVGFGYETSQDKWVFELRDSKGRRPHLSGEVQL
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32870; Mature: 32870
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNAYCVELNAMPSLFSLYRKIFFGRKPGWDQQPLPYIKVSAPNVQVSEAKVSQYAQVCG CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHC FNFDGKLLPPTYLYVMAFRLHAVIFTHDGITFPLLGMIHLKNRIQVYRPTTVDEVFSLEC CCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCEEEECCCCHHHHHEEEE ALTTSRETDSGLEFEFVSKAFVGEELVWESLSTYLYRIETAGRRVRPPKALEMAWDSPQS EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC WELSEDLGRRYAKASGDYNLIHLHPVLSKRFGFDRVLAHGMWSKARCLAELMPEIGERPF CCHHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCE VVDVAFKLPLLMPAEVGFGYETSQDKWVFELRDSKGRRPHLSGEVQL EEEEEECCCEEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNNAYCVELNAMPSLFSLYRKIFFGRKPGWDQQPLPYIKVSAPNVQVSEAKVSQYAQVCG CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHC FNFDGKLLPPTYLYVMAFRLHAVIFTHDGITFPLLGMIHLKNRIQVYRPTTVDEVFSLEC CCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCEEEECCCCHHHHHEEEE ALTTSRETDSGLEFEFVSKAFVGEELVWESLSTYLYRIETAGRRVRPPKALEMAWDSPQS EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC WELSEDLGRRYAKASGDYNLIHLHPVLSKRFGFDRVLAHGMWSKARCLAELMPEIGERPF CCHHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCE VVDVAFKLPLLMPAEVGFGYETSQDKWVFELRDSKGRRPHLSGEVQL EEEEEECCCEEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA