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The map label for this gene is bphB [H]

Identifier: 113968887

GI number: 113968887

Start: 627149

End: 629302

Strand: Direct

Name: bphB [H]

Synonym: Shewmr4_0543

Alternate gene names: 113968887

Gene position: 627149-629302 (Clockwise)

Preceding gene: 113968885

Following gene: 113968888

Centisome position: 13.33

GC content: 45.78

Gene sequence:

>2154_bases
ATGGACATGGATAGTTTTCCCGAGTCTTTCAACTCCTCAAAAAGCGTTTATGCCAGCGTGATCAGTTCCAGTTGGCTGAT
GTTGCTCGCCGCCATTTTTTTCATGGGAATATCTTGGTATGTCCTCGAAGAATATTTAAGAGACCGTGGTGAAGAGCGCT
TTAATAATAATGTGCAAGACCTTATTGGTGCCGTAAGCAGCAGGATGTCAGCTTACGCGCAAGTTTTACGTGGCGGTGTA
GGGCTATTTCTCGCTTCTGATGGCGTTACGCGCCATGAATGGCAACTCTATGTTTCTAATGCCCGACTCTCTGAATATTA
TCCTGGTATTCAAGGTTTAGGATTTGCACAACTTTTAACGCCAGCGACCTTGGATGCATTTACTCGAGAAGTACAACAGG
AAGGGGTTGTTGATTACAGGGTAGCCCCCTCAGGGAATAGAGAACTCTATTGTGCTATCAAATACTTAGAGCCATTTGAT
TGGCGGAATCAACGGGCGCTTGGTTTTGACATGTGTTCAGAATCGACGCGACGCACAGCCATTTTGCATGCTATTGCTAC
AGGGTTTCCTACCGCGTCGGGTAAGGTCACCTTAGTGCAAGAAACCCCTGACGACACCCAAGCCGGTATTTTAATGTATG
CCCCTTTATACCATGGTCAGCCGATAACGGAGGAAGAACGTAAACAACAGGCCATAGGCGTTGTTTACGCCCCATTTCGT
ATGAACGACCTGATGCAAGGCATTATGGGAAAACGTTTTTCGGGCTTAAAACTGGCGATTTACGATGGGATTGAGGCTAA
CAAGGATACTCTGATGTTTACTAGCCACACCGCACTCCCTTCCGCAGATGATGTTTTTTATCAATCCCAGTTAGAGACAA
TGGAAGGTCAAGTATGGCGTTTGGAAGTGTCCTCTGAATCACGATTTATCTCGAGCTCTGAACAAACGCAAAGCATATGG
TTACAGGTAATTGGAAGTGCGTTTATTTTAGTCCTGTTCTACTCAGTGCTAACTATGGCGCGAAATCGCTATCAAGAATC
TCGATTAACGGCAGAGTTAATCGCTAACGAAAAACGCTTTCGCCTCGTCATTGAAGCTTCGCCGAGTGCGCTTTTTATGG
TGGATAGGGCGGGTATTATTACCTTAGTTAATACCCATGCTGAACGCTTATTTGGTTATGCAAGAGATGAGCTGCTCGGC
CGTTCGATCAATATGTTACTTCCCGAAGCGCTGAGAGATGTGCATCAACAGCATATGGGGAATTACCTGGTTCAGCCGAT
TGCGAAAAATATGTCACTACGGGATGACTTGTTTGGCTGTTGTAAAGATGGGACGCGCCTAGCGATTGAAGTTGGGTTGA
CACCTATCCACTTCAGCAATGGGGTGTCGATTCTGGCGACCATTAACAATGTGTCGGAGCGTAAGCGGATTGAAGCGCAG
CGCATTGAACATACCGCTGAACTTGAGCGCATCAACAAGGAACTTGACCAGTTTGCCTATATTGCCTCTCACGATCTGAA
ATCACCCCTGCGTGGCATAGAGCAATTAACTAACTGGTTAAGTGAAGATCTAGCCGAAAACACCGATGAAAATGTCCAAA
AATATCTAGGGTTAATCCAAAGCCGTATTCAACGTATGGTACTACTACTCGACGGGTTATTGATGTTTTCGCGTATTGGG
CGGGTTGATGCAGAGCGAGTTGAAGTCGATTCGCGGCAACTGATCGAAGACATGTTTGCCTTAGTTGCCCCGCCGCAGGG
GTTCAGCTTAGCTCTTGAAGGGAATTTCCCAAGGTTTAAGACAGTGAAAACCCTGTTAGAACTGGTGATTAGAAACTTAA
TCAGCAATGCGATTAAACACCACGATAAGGGCGAAGGCGTCATCAAAGTGATATGTGAAACCTCGAATCATCATTATTGG
TTTAGCGTGATTGATGATGGGCCAGGGATTTCTAGCCGTTTTCATGGGAAGGTATTCCAAATGTTCCAGACCCTTAGACC
AAGAGATGAAGTCGAAGGCAGTGGTTTGGGACTCTCTTTAGTTAAAAAGACAGTAGAAAGTCTCGGCGGAAAAATTCAAC
TAGAATCAGAGGGGCGGGGTTGCTGTTTCAGATTTAGCTGGCCAATGCACATAGTCAACAAGGAGGGGATATGA

Upstream 100 bases:

>100_bases
TTCCTACTTAAATAGTCGGAATTAACTTGAATTTGCCTGAAACACCAACAACACTTGGATAAGTCATTTTCATGAATTTG
GTGCTAGGGATTTAGCGTGT

Downstream 100 bases:

>100_bases
GCAATAGTCATGACTACAAACAAGTCACCATTTTATTAGTGGATGATGACGATGTGGATTATATGGCGGTGCAGAGGGCG
ATGAAGCAGTTGCGCTTATT

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MDMDSFPESFNSSKSVYASVISSSWLMLLAAIFFMGISWYVLEEYLRDRGEERFNNNVQDLIGAVSSRMSAYAQVLRGGV
GLFLASDGVTRHEWQLYVSNARLSEYYPGIQGLGFAQLLTPATLDAFTREVQQEGVVDYRVAPSGNRELYCAIKYLEPFD
WRNQRALGFDMCSESTRRTAILHAIATGFPTASGKVTLVQETPDDTQAGILMYAPLYHGQPITEEERKQQAIGVVYAPFR
MNDLMQGIMGKRFSGLKLAIYDGIEANKDTLMFTSHTALPSADDVFYQSQLETMEGQVWRLEVSSESRFISSSEQTQSIW
LQVIGSAFILVLFYSVLTMARNRYQESRLTAELIANEKRFRLVIEASPSALFMVDRAGIITLVNTHAERLFGYARDELLG
RSINMLLPEALRDVHQQHMGNYLVQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIEAQ
RIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTNWLSEDLAENTDENVQKYLGLIQSRIQRMVLLLDGLLMFSRIG
RVDAERVEVDSRQLIEDMFALVAPPQGFSLALEGNFPRFKTVKTLLELVIRNLISNAIKHHDKGEGVIKVICETSNHHYW
FSVIDDGPGISSRFHGKVFQMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMHIVNKEGI

Sequences:

>Translated_717_residues
MDMDSFPESFNSSKSVYASVISSSWLMLLAAIFFMGISWYVLEEYLRDRGEERFNNNVQDLIGAVSSRMSAYAQVLRGGV
GLFLASDGVTRHEWQLYVSNARLSEYYPGIQGLGFAQLLTPATLDAFTREVQQEGVVDYRVAPSGNRELYCAIKYLEPFD
WRNQRALGFDMCSESTRRTAILHAIATGFPTASGKVTLVQETPDDTQAGILMYAPLYHGQPITEEERKQQAIGVVYAPFR
MNDLMQGIMGKRFSGLKLAIYDGIEANKDTLMFTSHTALPSADDVFYQSQLETMEGQVWRLEVSSESRFISSSEQTQSIW
LQVIGSAFILVLFYSVLTMARNRYQESRLTAELIANEKRFRLVIEASPSALFMVDRAGIITLVNTHAERLFGYARDELLG
RSINMLLPEALRDVHQQHMGNYLVQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIEAQ
RIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTNWLSEDLAENTDENVQKYLGLIQSRIQRMVLLLDGLLMFSRIG
RVDAERVEVDSRQLIEDMFALVAPPQGFSLALEGNFPRFKTVKTLLELVIRNLISNAIKHHDKGEGVIKVICETSNHHYW
FSVIDDGPGISSRFHGKVFQMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMHIVNKEGI
>Mature_717_residues
MDMDSFPESFNSSKSVYASVISSSWLMLLAAIFFMGISWYVLEEYLRDRGEERFNNNVQDLIGAVSSRMSAYAQVLRGGV
GLFLASDGVTRHEWQLYVSNARLSEYYPGIQGLGFAQLLTPATLDAFTREVQQEGVVDYRVAPSGNRELYCAIKYLEPFD
WRNQRALGFDMCSESTRRTAILHAIATGFPTASGKVTLVQETPDDTQAGILMYAPLYHGQPITEEERKQQAIGVVYAPFR
MNDLMQGIMGKRFSGLKLAIYDGIEANKDTLMFTSHTALPSADDVFYQSQLETMEGQVWRLEVSSESRFISSSEQTQSIW
LQVIGSAFILVLFYSVLTMARNRYQESRLTAELIANEKRFRLVIEASPSALFMVDRAGIITLVNTHAERLFGYARDELLG
RSINMLLPEALRDVHQQHMGNYLVQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIEAQ
RIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTNWLSEDLAENTDENVQKYLGLIQSRIQRMVLLLDGLLMFSRIG
RVDAERVEVDSRQLIEDMFALVAPPQGFSLALEGNFPRFKTVKTLLELVIRNLISNAIKHHDKGEGVIKVICETSNHHYW
FSVIDDGPGISSRFHGKVFQMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMHIVNKEGI

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=365, Percent_Identity=24.6575342465753, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788549, Length=366, Percent_Identity=26.2295081967213, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786600, Length=395, Percent_Identity=25.5696202531646, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790861, Length=243, Percent_Identity=26.7489711934156, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786783, Length=299, Percent_Identity=23.4113712374582, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 80909; Mature: 80909

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMDSFPESFNSSKSVYASVISSSWLMLLAAIFFMGISWYVLEEYLRDRGEERFNNNVQD
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
LIGAVSSRMSAYAQVLRGGVGLFLASDGVTRHEWQLYVSNARLSEYYPGIQGLGFAQLLT
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCHHHHCCCCCCCCHHHHHC
PATLDAFTREVQQEGVVDYRVAPSGNRELYCAIKYLEPFDWRNQRALGFDMCSESTRRTA
HHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHH
ILHAIATGFPTASGKVTLVQETPDDTQAGILMYAPLYHGQPITEEERKQQAIGVVYAPFR
HHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEECCHH
MNDLMQGIMGKRFSGLKLAIYDGIEANKDTLMFTSHTALPSADDVFYQSQLETMEGQVWR
HHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEE
LEVSSESRFISSSEQTQSIWLQVIGSAFILVLFYSVLTMARNRYQESRLTAELIANEKRF
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RLVIEASPSALFMVDRAGIITLVNTHAERLFGYARDELLGRSINMLLPEALRDVHQQHMG
EEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NYLVQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIEAQ
HHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEHHHHHHHHHHHHH
RIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTNWLSEDLAENTDENVQKYLGLIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SRIQRMVLLLDGLLMFSRIGRVDAERVEVDSRQLIEDMFALVAPPQGFSLALEGNFPRFK
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
TVKTLLELVIRNLISNAIKHHDKGEGVIKVICETSNHHYWFSVIDDGPGISSRFHGKVFQ
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHH
MFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMHIVNKEGI
HHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCEEECCCCCC
>Mature Secondary Structure
MDMDSFPESFNSSKSVYASVISSSWLMLLAAIFFMGISWYVLEEYLRDRGEERFNNNVQD
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
LIGAVSSRMSAYAQVLRGGVGLFLASDGVTRHEWQLYVSNARLSEYYPGIQGLGFAQLLT
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCHHHHCCCCCCCCHHHHHC
PATLDAFTREVQQEGVVDYRVAPSGNRELYCAIKYLEPFDWRNQRALGFDMCSESTRRTA
HHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHH
ILHAIATGFPTASGKVTLVQETPDDTQAGILMYAPLYHGQPITEEERKQQAIGVVYAPFR
HHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEECCHH
MNDLMQGIMGKRFSGLKLAIYDGIEANKDTLMFTSHTALPSADDVFYQSQLETMEGQVWR
HHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEE
LEVSSESRFISSSEQTQSIWLQVIGSAFILVLFYSVLTMARNRYQESRLTAELIANEKRF
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RLVIEASPSALFMVDRAGIITLVNTHAERLFGYARDELLGRSINMLLPEALRDVHQQHMG
EEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NYLVQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIEAQ
HHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEHHHHHHHHHHHHH
RIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTNWLSEDLAENTDENVQKYLGLIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SRIQRMVLLLDGLLMFSRIGRVDAERVEVDSRQLIEDMFALVAPPQGFSLALEGNFPRFK
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
TVKTLLELVIRNLISNAIKHHDKGEGVIKVICETSNHHYWFSVIDDGPGISSRFHGKVFQ
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHH
MFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMHIVNKEGI
HHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]