| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968885
Identifier: 113968885
GI number: 113968885
Start: 625586
End: 626548
Strand: Direct
Name: 113968885
Synonym: Shewmr4_0541
Alternate gene names: NA
Gene position: 625586-626548 (Clockwise)
Preceding gene: 113968883
Following gene: 113968887
Centisome position: 13.29
GC content: 45.59
Gene sequence:
>963_bases ATGGCTGCAATGAGCTATTTAAGTGTGATTGAGCGTTATCATGAATATGAGGTCACAGTGCACGAGCTGATGGAGTCGAT TTTAACGGGTATTGCCGACGCGGATTTATTTCACCAACCCAAAGTCGATATCAAGGCCATGAAAGGGATTGCGGGAAGCT ATCCCTTTGTCGAACTGATGTATTTACTCGATACCCAAGGGGTTCAAATTAGCCAAAATATCGCTGTGGTTGACCAGCAA ATCAAGTTAGTCCCACTCGGTGGCAATCGCGATCGAAGCCAGCGACCCTACTTTATCAATCGGGATGAGTCTGATGGGGT GAATATCACTCGACCTTATCTATCCAATGCCAGTGGTAACTTGTGTTTATCGGCATCCTTAGCGATTGTGCAGCAGGAGC AAAAGCTGGGCTATCTGGTCGTCGATGTGGATTTGACTCGCATGATTGAATTTATGATGGGCGACAGTGCTCGTCGGCGG GTGACTCCGGCCTTTAAAGCCGTGTATGGTCTGATTGTCGCAGGGCTTTTTGTGCTGGTGATGGTGCTACTTTGGACAGC GCTGAGGGATATTTATGGATTATTTGTGGTGGATCATGTCGGGCAAGATCCATTGCAACCCTTTGGGATTATTATCTTTA TGACCTTAGCCTTAGCAATCTTCGACCTTGGTAAAACGATTCTAGAGGAAGAAGTGTTAATGCATAAGGATATTTTTCGC CACAGCTCAACCCGCAGAACCATTACTCGCTTTGTTTCAACGATTTTGATCGCTATTTCAATCGAAGCCTTATTGACCAT GTTTAAGGCGTCACTGGGCGAGAAACAATATATCGAGCCTGCGATATGGATGATGCTCGCCGTGGTGGGATTATTAGTTG GATTAGGGGCTTATGTATATCTCGGGGCAAAAGCAGAATGGCTGCTGATCAAAACTCAGGCTTATAAGAGTGGTAAAAAA TAG
Upstream 100 bases:
>100_bases CACTTATTTCATAATCTGCTGTTAAATAATGACTTTTCCTTATGGCATTAAAGCTGCTTTGCTTGTGTGAGCAATGTGAT GATGGCAATGGGAGAGGGTT
Downstream 100 bases:
>100_bases CATTAAAATAACAGTATATTGTCGCACCCAGCCCCAAGGAGCTGGGTGAGGCATGTAACGAAAAACGCAGGGTCTGAGTG ACCTAACGCCTCAAGGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: General Glycosylation Pathway Protein PglG; Inner Membrane Protein; Cache Domain Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAAMSYLSVIERYHEYEVTVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELMYLLDTQGVQISQNIAVVDQQ IKLVPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGNLCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRR VTPAFKAVYGLIVAGLFVLVMVLLWTALRDIYGLFVVDHVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK
Sequences:
>Translated_320_residues MAAMSYLSVIERYHEYEVTVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELMYLLDTQGVQISQNIAVVDQQ IKLVPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGNLCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRR VTPAFKAVYGLIVAGLFVLVMVLLWTALRDIYGLFVVDHVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK >Mature_319_residues AAMSYLSVIERYHEYEVTVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELMYLLDTQGVQISQNIAVVDQQI KLVPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGNLCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRRV TPAFKAVYGLIVAGLFVLVMVLLWTALRDIYGLFVVDHVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFRH SSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35820; Mature: 35689
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMSYLSVIERYHEYEVTVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCCHHHHHH YLLDTQGVQISQNIAVVDQQIKLVPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGN HHHCCCCCEEECCHHEEECEEEEEECCCCCCCCCCCEEECCCCCCCCEEECHHHCCCCCC LCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRRVTPAFKAVYGLIVAGLFVLV EEEHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH MVLLWTALRDIYGLFVVDHVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHEE LGAKAEWLLIKTQAYKSGKK ECCCCEEEEEEEHHHCCCCC >Mature Secondary Structure AAMSYLSVIERYHEYEVTVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCCHHHHHH YLLDTQGVQISQNIAVVDQQIKLVPLGGNRDRSQRPYFINRDESDGVNITRPYLSNASGN HHHCCCCCEEECCHHEEECEEEEEECCCCCCCCCCCEEECCCCCCCCEEECHHHCCCCCC LCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRRVTPAFKAVYGLIVAGLFVLV EEEHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH MVLLWTALRDIYGLFVVDHVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHEE LGAKAEWLLIKTQAYKSGKK ECCCCEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA