| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968877
Identifier: 113968877
GI number: 113968877
Start: 616699
End: 617718
Strand: Direct
Name: 113968877
Synonym: Shewmr4_0533
Alternate gene names: NA
Gene position: 616699-617718 (Clockwise)
Preceding gene: 113968876
Following gene: 113968878
Centisome position: 13.1
GC content: 48.73
Gene sequence:
>1020_bases ATGGGGATCTTTGAACGTTATTTAAGTCTCTGGGTTGGCTTGAGTATTCTTGCAGGGGTCGCGCTTGGAAACCTGGCGCC GGGTGTATTTGCCGCTGTGGCTGCCATCGAATTTGCCCATGTTAACTTAGTCATCGCCCTGTTTATCTGGGTAATGATTT ACCCCATGATGGTGCAAATTGATTTTTCTGCGGTGAAAGATGTTGGGAAGACACCGAAAGGATTGGTGTTAACGCTCATC ATTAACTGGTTAGTTAAACCTTTCACTATGGCATTGCTGGGGGGGCTATTTTTTAAGTTGCTATTTGCCGACTGGGTTGA CCCTCAAAGCGCCAGTGAATATATCGCGGGGATGATTCTGCTCGGAGTGGCGCCTTGTACCGCCATGGTGTTTGTTTGGA GCCAACTGACGAAGGGCGATCCTAACTACACTTTAGTGCAAGTCTCTGTTAACGATATCATTATGGTGTTTTTGTTTGCG CCGCTCTGCGCGTTGTTGCTGGGAGTGAGTGATATTCAAGTGCCGTGGGAAACCCTGCTGCTTTCAGTGGTGTTGTATGT CTTATTGCCCTTAGTCGCAGGCGTGTTAACTCGAAAGCGCCTCGAGGCAAGCCATGGTGCCAGCGCGGTGCCGCAGCTAT TGGCTAAACTCAAACCTTGGTCTGTGATAGGGCTACTCGCGACGGTTGTGCTGTTATTTGGTTTTCAGGCCAAGACTATA GTGACACAGCCACAAAATATTCTACTCATAGCTATTCCTTTGATTATTCAGACCTATGGCATTTTTATCTTGACCTACTG GTTGGCGCTAAAGCTCAAACTGACCCATGCCATTGCCGCGCCCGCGAGCATGATAGGTTCTTCTAACTTCTTTGAATTAG CCGTGGCGGTTGCGATCTCTCTCTTTGGTCTGCACTCGGGAGCTGCCTTAGCGACAGTGGTAGGGGTATTGGTCGAGGTG CCTGTGATGTTATCGCTGGTGTACTTTGCTAATCACACGCGGCACTGGTTTCAATATTGA
Upstream 100 bases:
>100_bases CCGAGAGTATGCAGAACCTGTGCAGCATGGGTGCTCGTCCCGAACGCGCTAAAGCCTGTTGTTGAATTGAAAAGAATGCA TTTTGTGAGTCGAGGTTGTT
Downstream 100 bases:
>100_bases GGCATCGAAACACGTAGGTCGGCATTGCATTAAGGAGCAATATGTTCCAAATATTTACTGATTTGGCGACTTGGCTAGTG TACGGCGTGTTTGGCTTAGA
Product: bile acid:sodium symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGIFERYLSLWVGLSILAGVALGNLAPGVFAAVAAIEFAHVNLVIALFIWVMIYPMMVQIDFSAVKDVGKTPKGLVLTLI INWLVKPFTMALLGGLFFKLLFADWVDPQSASEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFA PLCALLLGVSDIQVPWETLLLSVVLYVLLPLVAGVLTRKRLEASHGASAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI VTQPQNILLIAIPLIIQTYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAISLFGLHSGAALATVVGVLVEV PVMLSLVYFANHTRHWFQY
Sequences:
>Translated_339_residues MGIFERYLSLWVGLSILAGVALGNLAPGVFAAVAAIEFAHVNLVIALFIWVMIYPMMVQIDFSAVKDVGKTPKGLVLTLI INWLVKPFTMALLGGLFFKLLFADWVDPQSASEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFA PLCALLLGVSDIQVPWETLLLSVVLYVLLPLVAGVLTRKRLEASHGASAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI VTQPQNILLIAIPLIIQTYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAISLFGLHSGAALATVVGVLVEV PVMLSLVYFANHTRHWFQY >Mature_338_residues GIFERYLSLWVGLSILAGVALGNLAPGVFAAVAAIEFAHVNLVIALFIWVMIYPMMVQIDFSAVKDVGKTPKGLVLTLII NWLVKPFTMALLGGLFFKLLFADWVDPQSASEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFAP LCALLLGVSDIQVPWETLLLSVVLYVLLPLVAGVLTRKRLEASHGASAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTIV TQPQNILLIAIPLIIQTYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAISLFGLHSGAALATVVGVLVEVP VMLSLVYFANHTRHWFQY
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=314, Percent_Identity=25.796178343949, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 36794; Mature: 36663
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFERYLSLWVGLSILAGVALGNLAPGVFAAVAAIEFAHVNLVIALFIWVMIYPMMVQI CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFSAVKDVGKTPKGLVLTLIINWLVKPFTMALLGGLFFKLLFADWVDPQSASEYIAGMIL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFAPLCALLLGVSDIQVPWETLL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LSVVLYVLLPLVAGVLTRKRLEASHGASAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHE VTQPQNILLIAIPLIIQTYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAIS EECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LFGLHSGAALATVVGVLVEVPVMLSLVYFANHTRHWFQY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure GIFERYLSLWVGLSILAGVALGNLAPGVFAAVAAIEFAHVNLVIALFIWVMIYPMMVQI CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFSAVKDVGKTPKGLVLTLIINWLVKPFTMALLGGLFFKLLFADWVDPQSASEYIAGMIL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFAPLCALLLGVSDIQVPWETLL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LSVVLYVLLPLVAGVLTRKRLEASHGASAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHE VTQPQNILLIAIPLIIQTYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAIS EECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LFGLHSGAALATVVGVLVEVPVMLSLVYFANHTRHWFQY HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]