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The map label for this gene is 113968842

Identifier: 113968842

GI number: 113968842

Start: 569518

End: 570801

Strand: Direct

Name: 113968842

Synonym: Shewmr4_0498

Alternate gene names: NA

Gene position: 569518-570801 (Clockwise)

Preceding gene: 113968841

Following gene: 113968843

Centisome position: 12.1

GC content: 50.55

Gene sequence:

>1284_bases
ATGCATAAAATCACTTCATACCTAATGTTAGATGAACAGGCCAAAGAGCTTGTTGACCTTGTTCATGGAACCCAGATCGG
CCTGACTTTTTCAGAAACCGCCGTACTTGTATTGCTGTTATCTGCCCCGAACGCGATTTTTACCAAGGAAGAATTGCTGC
AAGTCGGCTGGCCAGAACGTGTGGTCGCGCCTACCTCATTAACCCAGTGCATCAGTACCTTACGTAAAAAGTTAGAGCCT
TATACCGAAGTGCAGCTCAAAACGGTGGCGCGCCGCGGTTATCAGTTGCATGTGTCCGAACAGTCCCATGTGAAGATGTT
GGCAATTAACGATGCCGATGCGATCCGCGATGCCATTGTCGGTGTCTCGGCGTGGACGAAACTGGCAGGCATCGTCATGC
TGGGGTTAATCCTTATCTCTGTGTGGTACTGGAGCGATCACCATGCCGTGGTCAAACAGGTCGCAAAATGGAACGCCGAT
AAATATATCAGCCTCAATATTGGCGGTACCTTGGGCACGGCACAGGTGCTGTATATCGACGACGAAGAACATTTACATCC
CTCGTGGTGGCAAAAGCATCTAGCGCCAGAAGGTAACCATATCAGCGGCTTGCCTTATTTCAGCGCCTTCGCCGCAACGG
ATGGTAAAAACTATTCGATGGCTATTTGCCCCTCGCTCGATGCCAAGGATTGTAACGGCAAGGGCATCATCAATATCACC
TCGATTGATGCAACGCCGGTGGGCCTTAACATGGCCGAGTTTATCCCGCTGAGTAAGACGATGGAGGAGCGTATTCGCTA
CAACCGCATCGTGCTGCCGATTGATGACAAGGGGGCGGGGGAGCTGCTGGAGCATAACTACCACGCGGATATATATTTCC
CAGTGGCGGGCGAGCTGCTGGTGCGTACGGATCTCAGCATGTCGCTGGTGTACGAAGGGGAGAATCGGGGCAAGTTTTAC
TCCACCTCCTGCATTACCGATCAGGACTGTTTAACCACGCCGATTAAGTACACTATCCGTGGGGAGTTTGAGCAGTATCA
AACGCAAATTGATGATCTGAATGTGGATGTATTCCATGTCAAAGTGTCGCAAAAAGAGCTCACCAAACCCGATGAGGTGA
GTGGCTCTGCCATGCAGTTTTACCGCGCGATCCGTAAGCACGATATTCGCGATGAAGATCTGTTTTACTATCGGGTTTAT
CAAAATAAGGGCACGGCGGTGTGGATAGTCCCACAAATGGGACAACTGCTGGCCTGGACTCAGTACACTCAAGTCAAACT
CTAA

Upstream 100 bases:

>100_bases
AGGAATCACGGTTGCTCTCGGGTGAGACTGAGTTTCACTGTGTTTGCCCGTTGTTAGCGCAATCATAGTCTATTGTGTTG
GCTTAGTTTGGGCGCTTAAC

Downstream 100 bases:

>100_bases
CCTAGTGTGTTATGCAAACAGCCGATAGCCATCGGCTGTTTGGGTTTTTGCTAGCAGCATCTGTTTGTAGAGAGGTAGAG
TGTATTAAAGACTTTGCATT

Product: lysine decarboxylase transcriptional regulator, CadC

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MHKITSYLMLDEQAKELVDLVHGTQIGLTFSETAVLVLLLSAPNAIFTKEELLQVGWPERVVAPTSLTQCISTLRKKLEP
YTEVQLKTVARRGYQLHVSEQSHVKMLAINDADAIRDAIVGVSAWTKLAGIVMLGLILISVWYWSDHHAVVKQVAKWNAD
KYISLNIGGTLGTAQVLYIDDEEHLHPSWWQKHLAPEGNHISGLPYFSAFAATDGKNYSMAICPSLDAKDCNGKGIINIT
SIDATPVGLNMAEFIPLSKTMEERIRYNRIVLPIDDKGAGELLEHNYHADIYFPVAGELLVRTDLSMSLVYEGENRGKFY
STSCITDQDCLTTPIKYTIRGEFEQYQTQIDDLNVDVFHVKVSQKELTKPDEVSGSAMQFYRAIRKHDIRDEDLFYYRVY
QNKGTAVWIVPQMGQLLAWTQYTQVKL

Sequences:

>Translated_427_residues
MHKITSYLMLDEQAKELVDLVHGTQIGLTFSETAVLVLLLSAPNAIFTKEELLQVGWPERVVAPTSLTQCISTLRKKLEP
YTEVQLKTVARRGYQLHVSEQSHVKMLAINDADAIRDAIVGVSAWTKLAGIVMLGLILISVWYWSDHHAVVKQVAKWNAD
KYISLNIGGTLGTAQVLYIDDEEHLHPSWWQKHLAPEGNHISGLPYFSAFAATDGKNYSMAICPSLDAKDCNGKGIINIT
SIDATPVGLNMAEFIPLSKTMEERIRYNRIVLPIDDKGAGELLEHNYHADIYFPVAGELLVRTDLSMSLVYEGENRGKFY
STSCITDQDCLTTPIKYTIRGEFEQYQTQIDDLNVDVFHVKVSQKELTKPDEVSGSAMQFYRAIRKHDIRDEDLFYYRVY
QNKGTAVWIVPQMGQLLAWTQYTQVKL
>Mature_427_residues
MHKITSYLMLDEQAKELVDLVHGTQIGLTFSETAVLVLLLSAPNAIFTKEELLQVGWPERVVAPTSLTQCISTLRKKLEP
YTEVQLKTVARRGYQLHVSEQSHVKMLAINDADAIRDAIVGVSAWTKLAGIVMLGLILISVWYWSDHHAVVKQVAKWNAD
KYISLNIGGTLGTAQVLYIDDEEHLHPSWWQKHLAPEGNHISGLPYFSAFAATDGKNYSMAICPSLDAKDCNGKGIINIT
SIDATPVGLNMAEFIPLSKTMEERIRYNRIVLPIDDKGAGELLEHNYHADIYFPVAGELLVRTDLSMSLVYEGENRGKFY
STSCITDQDCLTTPIKYTIRGEFEQYQTQIDDLNVDVFHVKVSQKELTKPDEVSGSAMQFYRAIRKHDIRDEDLFYYRVY
QNKGTAVWIVPQMGQLLAWTQYTQVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48233; Mature: 48233

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKITSYLMLDEQAKELVDLVHGTQIGLTFSETAVLVLLLSAPNAIFTKEELLQVGWPER
CCCHHHHHEECHHHHHHHHHHCCCEEEEEEECCEEEEEEEECCCCCCCHHHHHHCCCCCC
VVAPTSLTQCISTLRKKLEPYTEVQLKTVARRGYQLHVSEQSHVKMLAINDADAIRDAIV
EECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEECCHHHHHHHHH
GVSAWTKLAGIVMLGLILISVWYWSDHHAVVKQVAKWNADKYISLNIGGTLGTAQVLYID
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEC
DEEHLHPSWWQKHLAPEGNHISGLPYFSAFAATDGKNYSMAICPSLDAKDCNGKGIINIT
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCEEEECCCCCCCCCCCCEEEEEE
SIDATPVGLNMAEFIPLSKTMEERIRYNRIVLPIDDKGAGELLEHNYHADIYFPVAGELL
ECCCCCCCCCHHHHCCCHHHHHHHHHHCEEEEEECCCCCHHHHHCCCCCEEEEECCCCEE
VRTDLSMSLVYEGENRGKFYSTSCITDQDCLTTPIKYTIRGEFEQYQTQIDDLNVDVFHV
EEECCEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEE
KVSQKELTKPDEVSGSAMQFYRAIRKHDIRDEDLFYYRVYQNKGTAVWIVPQMGQLLAWT
EECHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHC
QYTQVKL
CEEEECC
>Mature Secondary Structure
MHKITSYLMLDEQAKELVDLVHGTQIGLTFSETAVLVLLLSAPNAIFTKEELLQVGWPER
CCCHHHHHEECHHHHHHHHHHCCCEEEEEEECCEEEEEEEECCCCCCCHHHHHHCCCCCC
VVAPTSLTQCISTLRKKLEPYTEVQLKTVARRGYQLHVSEQSHVKMLAINDADAIRDAIV
EECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEECCHHHHHHHHH
GVSAWTKLAGIVMLGLILISVWYWSDHHAVVKQVAKWNADKYISLNIGGTLGTAQVLYID
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEC
DEEHLHPSWWQKHLAPEGNHISGLPYFSAFAATDGKNYSMAICPSLDAKDCNGKGIINIT
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCEEEECCCCCCCCCCCCEEEEEE
SIDATPVGLNMAEFIPLSKTMEERIRYNRIVLPIDDKGAGELLEHNYHADIYFPVAGELL
ECCCCCCCCCHHHHCCCHHHHHHHHHHCEEEEEECCCCCHHHHHCCCCCEEEEECCCCEE
VRTDLSMSLVYEGENRGKFYSTSCITDQDCLTTPIKYTIRGEFEQYQTQIDDLNVDVFHV
EEECCEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEE
KVSQKELTKPDEVSGSAMQFYRAIRKHDIRDEDLFYYRVYQNKGTAVWIVPQMGQLLAWT
EECHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHC
QYTQVKL
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA