Click here to switch to the map view.

The map label for this gene is 113968841

Identifier: 113968841

GI number: 113968841

Start: 568417

End: 569304

Strand: Direct

Name: 113968841

Synonym: Shewmr4_0497

Alternate gene names: NA

Gene position: 568417-569304 (Clockwise)

Preceding gene: 113968840

Following gene: 113968842

Centisome position: 12.08

GC content: 51.46

Gene sequence:

>888_bases
ATGAGTCAGATAAGTATCGAGCAAGGCTGTGCCCAATATTGTCCCCCACGGGCGCTAACACTGATTCAAGCCGTTGCAGT
TAAAGAATTTAAGGACAATTTACGCAACCGTTGGCTGGGCTTGATGGCGGGTATCTTGTTGATTTTGTCCCTGTGCGTGA
GTTTTATGGGCAGCGCCGTGTCGGGTACAGTGGTGCTGCTCGATAGCGTACAAATCTTCTCTGGCTTAGTCACGCTCGCG
GTGTTTATCTTGCCCTTGGGGGCGATTTTACTCAGCTACGACAGTTTTGTCGGCGAGCGTGAGTCGGGCACGTTATTGCT
GCTACTCACCTATCCCTTGGCCCGTTGGCAGTTGGTGTGTGGCAAGTTGCTCGGCCATGCCTATGTGATGATTGCAGCCT
GTGTGATGGGGTTTGGCGCGACGGCATTGTTGCTACTGGCCTTTGTTGGCGGACACTCTAGATACGCCTTAGTCATAGGG
TTTATCCACTTGATTAGCAGCGGTATTTTGCTGTCGCTGGTGTTTGTGCTTTTGGGTTATTGCGTGAGTCTGTGTGTTCG
CGAAAAGGCCAAAGCCCTGGGCATATTACTGCTGCTGTGGTTTGTGTTGGTCTTGGTTTATGACTTAGTGCTACTCACGG
CGCTGGTGAGTCTGGCGGAAGTGTTCAATCGCCAGCTATTTAACCTATTGATTTTAATTAATCCTACCGATCTTTTCCGT
GCCTTGAACCTGCTGGCCAATCCCGCCGATACCCTGTCGGCTAAGAGTAGTCTCGCCCTGATTGCCCAAACGGGAATGGG
GCCTGTGCTGATGTACGCCATGCTGGCGGCTTGGATAGGGCTGTTAGGATTACTAGCCTGCTGGATTTTTGCGAGGCAAG
AGGTTTAG

Upstream 100 bases:

>100_bases
AGGATCTTTTCCATCACTTTATGGCAGGGCTGAATCGCTCTACTTCGTCAACCGCGTGCTCGGCGGTTGAAGACGAGCAA
GATCAAAGGGAGTTAGTGGC

Downstream 100 bases:

>100_bases
TTTTTTCTGCATTAGTTTAAATTTATGCTTTATAAACAATGGGTAAACTGAGTATAGGGTCACAGTATTTTATGTTGTTA
AGAAGTAAAATAAACCCTCT

Product: copper ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSQISIEQGCAQYCPPRALTLIQAVAVKEFKDNLRNRWLGLMAGILLILSLCVSFMGSAVSGTVVLLDSVQIFSGLVTLA
VFILPLGAILLSYDSFVGERESGTLLLLLTYPLARWQLVCGKLLGHAYVMIAACVMGFGATALLLLAFVGGHSRYALVIG
FIHLISSGILLSLVFVLLGYCVSLCVREKAKALGILLLLWFVLVLVYDLVLLTALVSLAEVFNRQLFNLLILINPTDLFR
ALNLLANPADTLSAKSSLALIAQTGMGPVLMYAMLAAWIGLLGLLACWIFARQEV

Sequences:

>Translated_295_residues
MSQISIEQGCAQYCPPRALTLIQAVAVKEFKDNLRNRWLGLMAGILLILSLCVSFMGSAVSGTVVLLDSVQIFSGLVTLA
VFILPLGAILLSYDSFVGERESGTLLLLLTYPLARWQLVCGKLLGHAYVMIAACVMGFGATALLLLAFVGGHSRYALVIG
FIHLISSGILLSLVFVLLGYCVSLCVREKAKALGILLLLWFVLVLVYDLVLLTALVSLAEVFNRQLFNLLILINPTDLFR
ALNLLANPADTLSAKSSLALIAQTGMGPVLMYAMLAAWIGLLGLLACWIFARQEV
>Mature_294_residues
SQISIEQGCAQYCPPRALTLIQAVAVKEFKDNLRNRWLGLMAGILLILSLCVSFMGSAVSGTVVLLDSVQIFSGLVTLAV
FILPLGAILLSYDSFVGERESGTLLLLLTYPLARWQLVCGKLLGHAYVMIAACVMGFGATALLLLAFVGGHSRYALVIGF
IHLISSGILLSLVFVLLGYCVSLCVREKAKALGILLLLWFVLVLVYDLVLLTALVSLAEVFNRQLFNLLILINPTDLFRA
LNLLANPADTLSAKSSLALIAQTGMGPVLMYAMLAAWIGLLGLLACWIFARQEV

Specific function: Involved in copper processing [H]

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31835; Mature: 31704

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQISIEQGCAQYCPPRALTLIQAVAVKEFKDNLRNRWLGLMAGILLILSLCVSFMGSAV
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SGTVVLLDSVQIFSGLVTLAVFILPLGAILLSYDSFVGERESGTLLLLLTYPLARWQLVC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH
GKLLGHAYVMIAACVMGFGATALLLLAFVGGHSRYALVIGFIHLISSGILLSLVFVLLGY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVSLCVREKAKALGILLLLWFVLVLVYDLVLLTALVSLAEVFNRQLFNLLILINPTDLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHH
ALNLLANPADTLSAKSSLALIAQTGMGPVLMYAMLAAWIGLLGLLACWIFARQEV
HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQISIEQGCAQYCPPRALTLIQAVAVKEFKDNLRNRWLGLMAGILLILSLCVSFMGSAV
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SGTVVLLDSVQIFSGLVTLAVFILPLGAILLSYDSFVGERESGTLLLLLTYPLARWQLVC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH
GKLLGHAYVMIAACVMGFGATALLLLAFVGGHSRYALVIGFIHLISSGILLSLVFVLLGY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVSLCVREKAKALGILLLLWFVLVLVYDLVLLTALVSLAEVFNRQLFNLLILINPTDLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHH
ALNLLANPADTLSAKSSLALIAQTGMGPVLMYAMLAAWIGLLGLLACWIFARQEV
HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]