| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968798
Identifier: 113968798
GI number: 113968798
Start: 517717
End: 517980
Strand: Direct
Name: 113968798
Synonym: Shewmr4_0454
Alternate gene names: NA
Gene position: 517717-517980 (Clockwise)
Preceding gene: 113968795
Following gene: 113968799
Centisome position: 11.0
GC content: 33.71
Gene sequence:
>264_bases GTGCTAATGATGCCAATGGTCATGGATGTTAAAGTGTTAACTGCTGTTTTTAAGATTAAATTCAGCCTTTATCACTTGGT GAAAATTCAAAGTTTGACCTATATCACAGTTTTAAACATTTATTCAGTTACAGCTTTCACAAACTTCTGCGGTATTTTTG TGCGTTTGAAAATTTTGCACATAACTTTAGATCAAAAACAGGTGATTTTTATCTCGAAAATGGCTTTTTTGCGCCTTTTG TCTGCAGTATTTGTGGTTGCCTAG
Upstream 100 bases:
>100_bases TTAGATAAGGTAGACTCGAACTCAGAGGGAAAAATAACTTGTTGTTTAAATGTGACAAAAATGCTTAAGGTGCGGCTGTT GCTGGTAAGAGTGATATTGA
Downstream 100 bases:
>100_bases TGGCAAAAGTACAAAATAAACTGCTTTGCCAAGTGTGACCTATGCCCTAAATTTGCCTAAAAAAATAATGGTATGAAGGT TGTCACCATGTCGTCTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILHITLDQKQVIFISKMAFLRLL SAVFVVA
Sequences:
>Translated_87_residues MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILHITLDQKQVIFISKMAFLRLL SAVFVVA >Mature_87_residues MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILHITLDQKQVIFISKMAFLRLL SAVFVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10020; Mature: 10020
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE ITLDQKQVIFISKMAFLRLLSAVFVVA EEECCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLMMPMVMDVKVLTAVFKIKFSLYHLVKIQSLTYITVLNIYSVTAFTNFCGIFVRLKILH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE ITLDQKQVIFISKMAFLRLLSAVFVVA EEECCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA