| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968701
Identifier: 113968701
GI number: 113968701
Start: 381208
End: 381621
Strand: Direct
Name: 113968701
Synonym: Shewmr4_0357
Alternate gene names: NA
Gene position: 381208-381621 (Clockwise)
Preceding gene: 113968700
Following gene: 113968703
Centisome position: 8.1
GC content: 50.0
Gene sequence:
>414_bases GTGTCAAAACGGGGCAAAAATACGGCAAGTGCGGTGTCGATTTTCAATATCGATGATTTGTCCACTTGGCAAAAATATCG CAAAGGCTTGTGTGATAGCTGCCATGCGACCTGCTGTACGCTACCCGTTGAAGTCACTGTGAGCGACTTAGTGCGCATGG CCTTAGTGGACGAGTTTGAGGCCGAGGGCGATCTCAAAGCCATCGCCAAACGTCTGCAAAAAGCGCGCATCATCGACAAC TTCAACCACAAAACCGCCATTTTTACCTTGGCCCGCATGGCGAACGATGATTGCTTATATTTAGATAGCAAAACCCGTCG CTGCACCATTTATCATCAACGCCCCGAAACTTGCCGCAATCATCCGCAAATCGGCCCTAAAGCGAATCACTGCCCTTATC GTCCCCGTGAGTAA
Upstream 100 bases:
>100_bases CAGCATCACAGCTTGTCTTGAGCATGGCGCGGCGCCGATTTATTTCTGCTTTTGGCCTGCTATAATTGCCGCCCTTTAAT TTCTAACTCTAGGTTCTGGC
Downstream 100 bases:
>100_bases GCTTTTGAATATGGAATTGGTACAGGGCTTCGAGTTGATGGCTGTCTCGCATCGCTTGCACCTGCCGATTAAATTCGCGC GCAATCAAGTCTTTATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSKRGKNTASAVSIFNIDDLSTWQKYRKGLCDSCHATCCTLPVEVTVSDLVRMALVDEFEAEGDLKAIAKRLQKARIIDN FNHKTAIFTLARMANDDCLYLDSKTRRCTIYHQRPETCRNHPQIGPKANHCPYRPRE
Sequences:
>Translated_137_residues MSKRGKNTASAVSIFNIDDLSTWQKYRKGLCDSCHATCCTLPVEVTVSDLVRMALVDEFEAEGDLKAIAKRLQKARIIDN FNHKTAIFTLARMANDDCLYLDSKTRRCTIYHQRPETCRNHPQIGPKANHCPYRPRE >Mature_136_residues SKRGKNTASAVSIFNIDDLSTWQKYRKGLCDSCHATCCTLPVEVTVSDLVRMALVDEFEAEGDLKAIAKRLQKARIIDNF NHKTAIFTLARMANDDCLYLDSKTRRCTIYHQRPETCRNHPQIGPKANHCPYRPRE
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15659; Mature: 15528
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRGKNTASAVSIFNIDDLSTWQKYRKGLCDSCHATCCTLPVEVTVSDLVRMALVDEFE CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCEECHHHHHHHHHHHHHC AEGDLKAIAKRLQKARIIDNFNHKTAIFTLARMANDDCLYLDSKTRRCTIYHQRPETCRN CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHC HPQIGPKANHCPYRPRE CCCCCCCCCCCCCCCCC >Mature Secondary Structure SKRGKNTASAVSIFNIDDLSTWQKYRKGLCDSCHATCCTLPVEVTVSDLVRMALVDEFE CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCEECHHHHHHHHHHHHHC AEGDLKAIAKRLQKARIIDNFNHKTAIFTLARMANDDCLYLDSKTRRCTIYHQRPETCRN CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHC HPQIGPKANHCPYRPRE CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA