Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 113968531

GI number: 113968531

Start: 212554

End: 212925

Strand: Direct

Name: secE [H]

Synonym: Shewmr4_0186

Alternate gene names: 113968531

Gene position: 212554-212925 (Clockwise)

Preceding gene: 113968530

Following gene: 113968532

Centisome position: 4.52

GC content: 45.16

Gene sequence:

>372_bases
ATGACAACAAATACTGAAAACCAGACTAACTCTCTGGATATCGTGAAGTGGGGTTTAGCGATCCTATTGCTGGCCGCTGC
TGTTATTGGCAATCAAATGTATAGCGAGACAAGTGCCGTGATCCGTGCACTGGCTGTTATCGTTGCATTCGCTATTGCTG
GTTTTATTGCCCTGCAAACAGAAAAGGGTAAGAAAGCCTTAGCGTTTGCTCGTGAGTCGCAAATTGAAGTGCGCAAGGTC
GTATGGCCGACGCGTCAAGAAGCGCTTAACACCACTTTTATTGTCCTTGCTGCAACAGGTATTTTAGCCCTTGTTTTATG
GGGTTTAGATGCTGTGTTAATGCACATTGTCAATTTCATCACTGGCGTATAG

Upstream 100 bases:

>100_bases
GGTATTCGGAATGCAGAGTATCTAAAGCGTATTGTAACTGGGTCGTATGTCCCTAATTATTGTGCTCAAGCTCAGGCCGT
ATTGAGTAACGGAATAACCG

Downstream 100 bases:

>100_bases
GCACCTCGAATGACTGAAGCTAAAGAAGCTAAAAAAAGATGGTATGTAGTGCAGGCATTCTCTGGCTATGAAGGCCGAGT
TTGTAAGTCACTGATTGAAT

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTTNTENQTNSLDIVKWGLAILLLAAAVIGNQMYSETSAVIRALAVIVAFAIAGFIALQTEKGKKALAFARESQIEVRKV
VWPTRQEALNTTFIVLAATGILALVLWGLDAVLMHIVNFITGV

Sequences:

>Translated_123_residues
MTTNTENQTNSLDIVKWGLAILLLAAAVIGNQMYSETSAVIRALAVIVAFAIAGFIALQTEKGKKALAFARESQIEVRKV
VWPTRQEALNTTFIVLAATGILALVLWGLDAVLMHIVNFITGV
>Mature_122_residues
TTNTENQTNSLDIVKWGLAILLLAAAVIGNQMYSETSAVIRALAVIVAFAIAGFIALQTEKGKKALAFARESQIEVRKVV
WPTRQEALNTTFIVLAATGILALVLWGLDAVLMHIVNFITGV

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=125, Percent_Identity=50.4, Blast_Score=120, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13254; Mature: 13123

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNTENQTNSLDIVKWGLAILLLAAAVIGNQMYSETSAVIRALAVIVAFAIAGFIALQT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EKGKKALAFARESQIEVRKVVWPTRQEALNTTFIVLAATGILALVLWGLDAVLMHIVNFI
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGV
HCC
>Mature Secondary Structure 
TTNTENQTNSLDIVKWGLAILLLAAAVIGNQMYSETSAVIRALAVIVAFAIAGFIALQT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EKGKKALAFARESQIEVRKVVWPTRQEALNTTFIVLAATGILALVLWGLDAVLMHIVNFI
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]