| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is exeI [H]
Identifier: 113968506
GI number: 113968506
Start: 183653
End: 184021
Strand: Direct
Name: exeI [H]
Synonym: Shewmr4_0161
Alternate gene names: 113968506
Gene position: 183653-184021 (Clockwise)
Preceding gene: 113968505
Following gene: 113968507
Centisome position: 3.9
GC content: 49.05
Gene sequence:
>369_bases ATGAAATACGCTAAGGGTATGACCCTACTCGAAGTGATAGTGGCCTTGGCGGTATTTGCCATCGCCGCCGTTTCTATCAC CAAAAGCTTGGGTGAGCAGATGGCGAATATGCCGATTCTGGAGTCTCGCACCCTTGCCCAATGGGTGGCAGACAACCAGA TGGTCGATGCCAGGCTCGATCCGCAATTTCCGGAAATCGGTAAAAAAGAAGGGCAGGTAGAACTCGCGGGCAAGGATTGG TACTGGCGTAAAGAAGTGGTGAAAACCACGGACGATAACTTTCGCATGATCCGTATTAGTGTCAGCGAAGATGAACGTTA TCAGCGTATTGCAGCACAAGTGAGCAGTTATGTCCTTAAAACAAACTAA
Upstream 100 bases:
>100_bases AGCGCCTTTGAGCTGAGCTTTATGACCAAGTCAGACAAGGGGCCACTCGATGTGTTAGTGGTGGGCGATGCCCTTGGCCG TTTAACCCTAGGGCGACCCG
Downstream 100 bases:
>100_bases TGCTCAAAAGGGTTTTACCCTGCTGGAAATGCTGATCGCGATTGCGATTTTTGCCATGTTAGGTTTAGCCGCCAATGCGG TACTCAGCACAGTGCTGACC
Product: general secretion pathway protein I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLDPQFPEIGKKEGQVELAGKDW YWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLKTN
Sequences:
>Translated_122_residues MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLDPQFPEIGKKEGQVELAGKDW YWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLKTN >Mature_122_residues MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLDPQFPEIGKKEGQVELAGKDW YWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLKTN
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010052 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR003413 [H]
Pfam domain/function: PF02501 GSPII_IJ; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 13856; Mature: 13856
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCC PQFPEIGKKEGQVELAGKDWYWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLK CCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC TN CC >Mature Secondary Structure MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCC PQFPEIGKKEGQVELAGKDWYWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLK CCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC TN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]