Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is exeH [H]

Identifier: 113968505

GI number: 113968505

Start: 183154

End: 183666

Strand: Direct

Name: exeH [H]

Synonym: Shewmr4_0160

Alternate gene names: 113968505

Gene position: 183154-183666 (Clockwise)

Preceding gene: 113968504

Following gene: 113968506

Centisome position: 3.89

GC content: 49.71

Gene sequence:

>513_bases
ATGGGACTCACCGCGGCGGCGGTGACCATGTCTATTGGCAATTCTGGCCCACAACAGGCGCTTGAGAAAACCGCGCAGCA
ATTTATCGCCGCCACTGAGTTAGTGCTGGATGAAACCGTATTGAGCGGCCAATTTATCGGTATCGTGGTGGAAAAAACCA
GCTATCAGTTTGTTTATTATAAAGATGGTAAATGGAATCCATTGGAGAAGGACAGGATCCTGTCTGAAAAACAAATGGAA
CCCGGAGTGGTGATAAATTTAGTGCTCGACGGCTTGCCACTCGTACAAGAGGATGAGCAGGATGAATCCTGGTTCGACGA
GCCTTTAATCGAGCCTTCTGCGGAAGATAAGAAAAAGCACCCAGAGCCGCAGATTTTGCTGTTTCCGAGTGGTGAAATGA
GCGCCTTTGAGCTGAGCTTTATGACCAAGTCAGACAAGGGGCCACTCGATGTGTTAGTGGTGGGCGATGCCCTTGGCCGT
TTAACCCTAGGGCGACCCGATGAAATACGCTAA

Upstream 100 bases:

>100_bases
GACGATATCGGTAACTGGAACTTACAGAACTTCCAATAAGATGTTAAAGCTGCGCCACGCCGGCTTCACCTTAATGGAGG
TGATGCTGGTGATTTTGTTA

Downstream 100 bases:

>100_bases
GGGTATGACCCTACTCGAAGTGATAGTGGCCTTGGCGGTATTTGCCATCGCCGCCGTTTCTATCACCAAAAGCTTGGGTG
AGCAGATGGCGAATATGCCG

Product: general secretion pathway protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGLTAAAVTMSIGNSGPQQALEKTAQQFIAATELVLDETVLSGQFIGIVVEKTSYQFVYYKDGKWNPLEKDRILSEKQME
PGVVINLVLDGLPLVQEDEQDESWFDEPLIEPSAEDKKKHPEPQILLFPSGEMSAFELSFMTKSDKGPLDVLVVGDALGR
LTLGRPDEIR

Sequences:

>Translated_170_residues
MGLTAAAVTMSIGNSGPQQALEKTAQQFIAATELVLDETVLSGQFIGIVVEKTSYQFVYYKDGKWNPLEKDRILSEKQME
PGVVINLVLDGLPLVQEDEQDESWFDEPLIEPSAEDKKKHPEPQILLFPSGEMSAFELSFMTKSDKGPLDVLVVGDALGR
LTLGRPDEIR
>Mature_169_residues
GLTAAAVTMSIGNSGPQQALEKTAQQFIAATELVLDETVLSGQFIGIVVEKTSYQFVYYKDGKWNPLEKDRILSEKQMEP
GVVINLVLDGLPLVQEDEQDESWFDEPLIEPSAEDKKKHPEPQILLFPSGEMSAFELSFMTKSDKGPLDVLVVGDALGRL
TLGRPDEIR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR022346 [H]

Pfam domain/function: PF12019 GspH [H]

EC number: NA

Molecular weight: Translated: 18796; Mature: 18664

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTAAAVTMSIGNSGPQQALEKTAQQFIAATELVLDETVLSGQFIGIVVEKTSYQFVYY
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEE
KDGKWNPLEKDRILSEKQMEPGVVINLVLDGLPLVQEDEQDESWFDEPLIEPSAEDKKKH
ECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCHHHCC
PEPQILLFPSGEMSAFELSFMTKSDKGPLDVLVVGDALGRLTLGRPDEIR
CCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCC
>Mature Secondary Structure 
GLTAAAVTMSIGNSGPQQALEKTAQQFIAATELVLDETVLSGQFIGIVVEKTSYQFVYY
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEE
KDGKWNPLEKDRILSEKQMEPGVVINLVLDGLPLVQEDEQDESWFDEPLIEPSAEDKKKH
ECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCHHHCC
PEPQILLFPSGEMSAFELSFMTKSDKGPLDVLVVGDALGRLTLGRPDEIR
CCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]