| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113968458
Identifier: 113968458
GI number: 113968458
Start: 127068
End: 127454
Strand: Direct
Name: 113968458
Synonym: Shewmr4_0113
Alternate gene names: NA
Gene position: 127068-127454 (Clockwise)
Preceding gene: 113968455
Following gene: 113968461
Centisome position: 2.7
GC content: 51.68
Gene sequence:
>387_bases ATGAAATTTACTAAGATAATCAATATGAAAACCGCCGCAGTGGCGGGACTTTTCGCCATGACGCTAGGCACGCCTGCGAT GGCTGCAGAAAAACCGTCCTTTGATTGCAGCAAAGTGCGCGCCGGCAGTATCGAGGAGCTGGTGTGTCAGGATGAGGGCT TAATTAAGCTCGATCAACAACTCGCCGAGGTGTATACCAAGGCCACGGAAAAAGCCAAAAACGAACAACCGCCCACCCTC AAAGCCATGCAGCGAGGATGGGTGAAGGGGCGTGATGAGTGTTGGAAGAGCGAAGATAAACGCGCCTGTGTTGAATCGAC TTACCAGACGCGGATTGCCGAGTTACAGGCGCAGTATCGTTTGGTGGAAATTTGCTGTTATCGGTGA
Upstream 100 bases:
>100_bases TATTGAGGGGTATTTTGCTTAAGTCAGCTTAGGTTAAGCCGAGATAAGGTTAGCTATGGACAAGAGATCGCTCGGGGTCC TAGATAAAGGGAATGAAACA
Downstream 100 bases:
>100_bases CATCTATCGCCGCCTCGGCACTGCCGCTGTAGCGCCATTCTGACTGGTTTAAGGTCTCGGAATAGATTAATTCACTGATG GGGATTTGCCTTTGATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVYTKATEKAKNEQPPTL KAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEICCYR
Sequences:
>Translated_128_residues MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVYTKATEKAKNEQPPTL KAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEICCYR >Mature_128_residues MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQLAEVYTKATEKAKNEQPPTL KAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYRLVEICCYR
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14431; Mature: 14431
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCCHHHHHH LAEVYTKATEKAKNEQPPTLKAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYR HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LVEICCYR HHHHHHCC >Mature Secondary Structure MKFTKIINMKTAAVAGLFAMTLGTPAMAAEKPSFDCSKVRAGSIEELVCQDEGLIKLDQQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCCHHHHHH LAEVYTKATEKAKNEQPPTLKAMQRGWVKGRDECWKSEDKRACVESTYQTRIAELQAQYR HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LVEICCYR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA