| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is fucP [C]
Identifier: 113968410
GI number: 113968410
Start: 75909
End: 77129
Strand: Direct
Name: fucP [C]
Synonym: Shewmr4_0065
Alternate gene names: 113968410
Gene position: 75909-77129 (Clockwise)
Preceding gene: 113968408
Following gene: 113968411
Centisome position: 1.61
GC content: 46.52
Gene sequence:
>1221_bases ATGGTAAGTGATTCAAATTCTGCAGAAAATCGCCATCACACTCGAATTAGAGTGTTGACGTATTTAATGTTTTTTATGTT CGCTATGACCTCAGATGCCGTGGGCGTGATCATTCCTCAGCTCATTTCTGAGTTTGGCCTCTCTTTATCACAGGCGAGCG CCTTTCATTATATGCCGATGATTTTTATTGCAATAAGTGGTCTATTCCTCGGTTTTTTGGCGGATAAAATAGGGCGTAAA CTAACCATTTTATTAGGGCTGTTGTTGTTCGCCATTGCCTGTTTTTTATTTGCGCTTGGGGAGTCGTTTTATTATTTCCT GCTGCTATTGGCCTTGGTGGGCTTGGCAATAGGGGTATTTAAAACCGGGGCCTTAGCCCTGATCGGTGATATTTCTCGGT CGACAAAACAGCATTCCAGCACCATGAATACGGTCGAAGGATTTTTTGGGGTCGGCGCCATGGTGGGGCCAGCCATTGTC AGCTATCTGCTTATCAGTGGTGTGTCATGGAAGTATTTGTATTTTGGGGCGGGTGTGTTTTGTCTGCTGCTCTGTTGGTT AGCATTTAGGGCCGATTATCCGCAGGTTAAGCGATCTTCAACGGAAACAATTAATCTGACGAATACCTTCAGTATGATGA AAAATCCTTATGCATTAGGTTTTTCCCTTGCTATTGGTTTGTATGTGGCCACCGAAGTGGCGATTTATGTATGGATGCCT AGCTTGCTGCAAGAGTATCAGGGGGATTACACAGTACTTGCGGCCTATGCCTTGACCATCTTTTTTACCCTGCGAGCGGG TGGACGGTTTTTGGGAGGGTGGATACTAAATCACTTTTCGTGGCAACAGGTTATGTTCTGGTTTAGCTTAGCGATCAGCA TTTGCTACCTCGGCTCTATGCTCTATGGCGTTGAGGCCGCAGTTATTCTCTTGCCCCTCTCTGGGCTGTTTATGTCAATG ATGTATCCCACTTTAAACTCCAAGGGGATCAGTTGTTTCCCCGTGGCACAGCACGGCTCTGTGGCTGGAGTTATCCTGTT TTTTACCGCGGTTTCTGCGGCGTTGGCTCCCCTGTGCATGGGGTTAGTTGGGGATATTTTCGGCCATGTGAAGTATGGCT TTTACCTCGCAACCGGGTTTGCCGTTTTGTTGTGCCTGTTAGCGGGGGTTAATCTGATTAAAGATCCTTCTCAAGCTCTG TTAAGCCGTGAAACCGCTTGA
Upstream 100 bases:
>100_bases GGGGATTAACTCACTGCTGTACATAAATAATGCCTAAAGCTGTTTGGGGCTTAGCTAGCTTCAAAGGGGATTTAGCGCGA TAACGATAAGGTGAAACAGT
Downstream 100 bases:
>100_bases ATTGAAATGTGACAGAAAAATTTTTTCTGTCACATTTTTTCGATTAATCAATTAATTGCCAGCTGTTCCCACTTTAAGTT TGTTGGCTTGTACAAAAAAC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MVSDSNSAENRHHTRIRVLTYLMFFMFAMTSDAVGVIIPQLISEFGLSLSQASAFHYMPMIFIAISGLFLGFLADKIGRK LTILLGLLLFAIACFLFALGESFYYFLLLLALVGLAIGVFKTGALALIGDISRSTKQHSSTMNTVEGFFGVGAMVGPAIV SYLLISGVSWKYLYFGAGVFCLLLCWLAFRADYPQVKRSSTETINLTNTFSMMKNPYALGFSLAIGLYVATEVAIYVWMP SLLQEYQGDYTVLAAYALTIFFTLRAGGRFLGGWILNHFSWQQVMFWFSLAISICYLGSMLYGVEAAVILLPLSGLFMSM MYPTLNSKGISCFPVAQHGSVAGVILFFTAVSAALAPLCMGLVGDIFGHVKYGFYLATGFAVLLCLLAGVNLIKDPSQAL LSRETA
Sequences:
>Translated_406_residues MVSDSNSAENRHHTRIRVLTYLMFFMFAMTSDAVGVIIPQLISEFGLSLSQASAFHYMPMIFIAISGLFLGFLADKIGRK LTILLGLLLFAIACFLFALGESFYYFLLLLALVGLAIGVFKTGALALIGDISRSTKQHSSTMNTVEGFFGVGAMVGPAIV SYLLISGVSWKYLYFGAGVFCLLLCWLAFRADYPQVKRSSTETINLTNTFSMMKNPYALGFSLAIGLYVATEVAIYVWMP SLLQEYQGDYTVLAAYALTIFFTLRAGGRFLGGWILNHFSWQQVMFWFSLAISICYLGSMLYGVEAAVILLPLSGLFMSM MYPTLNSKGISCFPVAQHGSVAGVILFFTAVSAALAPLCMGLVGDIFGHVKYGFYLATGFAVLLCLLAGVNLIKDPSQAL LSRETA >Mature_406_residues MVSDSNSAENRHHTRIRVLTYLMFFMFAMTSDAVGVIIPQLISEFGLSLSQASAFHYMPMIFIAISGLFLGFLADKIGRK LTILLGLLLFAIACFLFALGESFYYFLLLLALVGLAIGVFKTGALALIGDISRSTKQHSSTMNTVEGFFGVGAMVGPAIV SYLLISGVSWKYLYFGAGVFCLLLCWLAFRADYPQVKRSSTETINLTNTFSMMKNPYALGFSLAIGLYVATEVAIYVWMP SLLQEYQGDYTVLAAYALTIFFTLRAGGRFLGGWILNHFSWQQVMFWFSLAISICYLGSMLYGVEAAVILLPLSGLFMSM MYPTLNSKGISCFPVAQHGSVAGVILFFTAVSAALAPLCMGLVGDIFGHVKYGFYLATGFAVLLCLLAGVNLIKDPSQAL LSRETA
Specific function: Transport Of L-Fucose Into The Cell. [C]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44310; Mature: 44310
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDSNSAENRHHTRIRVLTYLMFFMFAMTSDAVGVIIPQLISEFGLSLSQASAFHYMPM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH IFIAISGLFLGFLADKIGRKLTILLGLLLFAIACFLFALGESFYYFLLLLALVGLAIGVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTGALALIGDISRSTKQHSSTMNTVEGFFGVGAMVGPAIVSYLLISGVSWKYLYFGAGVF HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH CLLLCWLAFRADYPQVKRSSTETINLTNTFSMMKNPYALGFSLAIGLYVATEVAIYVWMP HHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SLLQEYQGDYTVLAAYALTIFFTLRAGGRFLGGWILNHFSWQQVMFWFSLAISICYLGSM HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGVEAAVILLPLSGLFMSMMYPTLNSKGISCFPVAQHGSVAGVILFFTAVSAALAPLCM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH GLVGDIFGHVKYGFYLATGFAVLLCLLAGVNLIKDPSQALLSRETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCC >Mature Secondary Structure MVSDSNSAENRHHTRIRVLTYLMFFMFAMTSDAVGVIIPQLISEFGLSLSQASAFHYMPM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH IFIAISGLFLGFLADKIGRKLTILLGLLLFAIACFLFALGESFYYFLLLLALVGLAIGVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTGALALIGDISRSTKQHSSTMNTVEGFFGVGAMVGPAIVSYLLISGVSWKYLYFGAGVF HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH CLLLCWLAFRADYPQVKRSSTETINLTNTFSMMKNPYALGFSLAIGLYVATEVAIYVWMP HHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SLLQEYQGDYTVLAAYALTIFFTLRAGGRFLGGWILNHFSWQQVMFWFSLAISICYLGSM HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGVEAAVILLPLSGLFMSMMYPTLNSKGISCFPVAQHGSVAGVILFFTAVSAALAPLCM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH GLVGDIFGHVKYGFYLATGFAVLLCLLAGVNLIKDPSQALLSRETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA