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The map label for this gene is 113968395

Identifier: 113968395

GI number: 113968395

Start: 58053

End: 59630

Strand: Direct

Name: 113968395

Synonym: Shewmr4_0050

Alternate gene names: NA

Gene position: 58053-59630 (Clockwise)

Preceding gene: 113968394

Following gene: 113968401

Centisome position: 1.23

GC content: 38.02

Gene sequence:

>1578_bases
TTGAATACAAATAAACCTTTAAGATTTTTTGATTTTTCTTCTGCAGATAATCCGCTCGTTGAAATTCAGAGGAGATTGGG
ATCTCAACAGTCTCGTTATGTATCTAAGTACTTGAATTTTTTGGGTGCAAAAAAAGTATTAGTTGAGGATAATTACTTCG
ACAGGGACTATCTTAATGAATTCTCCGCATTTTATAGTCTTAGTGCCAAAGGGTATCCAAATATTTGTCAACGCCTTCAT
TTTTTTTCTACTATGCGGCTCGATAGAGAGTTGTTTGTTAGTGCGGTTGGAGGGGACGAAAGTGCTATTGATGAGCTTCA
AAATGGTTATTTAGGGTTTATAGTTGTTAGGCCTATTACTGATTCACCTTTTGGTAGAACGGTGTTGAAGTGGTATCCAG
ATCAAACACCGGGAACGCCAAGAGTTACACAACCATCTAGAGATTATGTATGCAATGTTGCTGGACTAGAGTTTTGTGTT
CATGGATTGGCATGGCAGCAGCAAGATTCTGGCGTCGCTGCATGCGCTACAATTGGTATTTGGAGCATGCTTCACTCCTC
AGCATTTAATGAATGTAATGCCATCCCAACAACATCAATGATAACTGAGGCTGCACATTCTTCTGCACTTGTAGGGCGTC
CACCTTATCCATCGCATTTCCTTAGAATTGATCAAATACAACATGCGATTATTCAACTTGGTTTTTCACCAGCCATAACT
AATGGTGAATTAGTTGGCCAATTCTTTACTACTGCTCGGTTTGCAAATACTTGCGCAGCATATCTTCGATCTGGCTATCC
TCTCCTAATTGGGGGCGTCCATGGTGATGGTGTACCAGTTGGTCATGCTGTTTGTGCTGTAGGATTTAGGGAGCCAGCTC
CTCAACAAGGAGGTGGTATTGCTGAGGTATCTTTACAAGATGATAATATTTCATACCTCTATATTCACGATGATAATATT
GGACCAAATGTTAGATTTAAATTAATCACACAAAAAGTCCATGAAGGAACTCCTGAAGAGTTTGAACGCTGTGTTATGAA
AATGGAGACTCCTGCTTACCTAAATGTTGGTGCGGCTGAAAACCTTGATAATACAACAATTATACCTCAATCCATTATTG
CTGCTGTTCATCCTGATCTTAAAATAACTTCAGATAGTTTTTTTCGACATGGTATATCTCTAACTGGAAGTTTACATGCC
GCATTAAAGGAATATACGGAAGGAATGAATATTGAACCAACATCACTTGTTTTTAGCACTCGTTTTGTGATGTTGAAAGA
TTACTTATCAATTGAACTAAAGAGACAGTTAGGGAGCGAGCCTGATTTATTATCTAACACTAGAATTCAGCTCCAAGAAA
ATGTACCGCCAATGAGTCTACATTTAGCATTACTTAGAATTGCGATGCCAGATGCATCTGTATTAATTGATGTTTTGTTT
GATACAACAGATACGGACAAAAACAGATCTGTTTTTTGTCATGTTGTATATGACCTAACATTTGCGAATTTTCTAGACGT
ACTACAGACTAATGTAAGAGAACGATTTTTAGGGGTGTTTGTGAAAGCATATAAATAA

Upstream 100 bases:

>100_bases
ATTCGGCTAACATTTTCTGATAATAAGACATTTTAACCGCCCGATAGTAAAACTAGGAGGCGGTTTTTGTTTATCCAATG
TTGCTACGCGGTCGATTGAA

Downstream 100 bases:

>100_bases
TTACAATCCCTTAATTTTATAGCGTCTGTAGGTAAGAGAGTTTGGTTCGTTGTATATAATAATTCTGGAGACTACAATCT
ATATTTTATAGTTAAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MNTNKPLRFFDFSSADNPLVEIQRRLGSQQSRYVSKYLNFLGAKKVLVEDNYFDRDYLNEFSAFYSLSAKGYPNICQRLH
FFSTMRLDRELFVSAVGGDESAIDELQNGYLGFIVVRPITDSPFGRTVLKWYPDQTPGTPRVTQPSRDYVCNVAGLEFCV
HGLAWQQQDSGVAACATIGIWSMLHSSAFNECNAIPTTSMITEAAHSSALVGRPPYPSHFLRIDQIQHAIIQLGFSPAIT
NGELVGQFFTTARFANTCAAYLRSGYPLLIGGVHGDGVPVGHAVCAVGFREPAPQQGGGIAEVSLQDDNISYLYIHDDNI
GPNVRFKLITQKVHEGTPEEFERCVMKMETPAYLNVGAAENLDNTTIIPQSIIAAVHPDLKITSDSFFRHGISLTGSLHA
ALKEYTEGMNIEPTSLVFSTRFVMLKDYLSIELKRQLGSEPDLLSNTRIQLQENVPPMSLHLALLRIAMPDASVLIDVLF
DTTDTDKNRSVFCHVVYDLTFANFLDVLQTNVRERFLGVFVKAYK

Sequences:

>Translated_525_residues
MNTNKPLRFFDFSSADNPLVEIQRRLGSQQSRYVSKYLNFLGAKKVLVEDNYFDRDYLNEFSAFYSLSAKGYPNICQRLH
FFSTMRLDRELFVSAVGGDESAIDELQNGYLGFIVVRPITDSPFGRTVLKWYPDQTPGTPRVTQPSRDYVCNVAGLEFCV
HGLAWQQQDSGVAACATIGIWSMLHSSAFNECNAIPTTSMITEAAHSSALVGRPPYPSHFLRIDQIQHAIIQLGFSPAIT
NGELVGQFFTTARFANTCAAYLRSGYPLLIGGVHGDGVPVGHAVCAVGFREPAPQQGGGIAEVSLQDDNISYLYIHDDNI
GPNVRFKLITQKVHEGTPEEFERCVMKMETPAYLNVGAAENLDNTTIIPQSIIAAVHPDLKITSDSFFRHGISLTGSLHA
ALKEYTEGMNIEPTSLVFSTRFVMLKDYLSIELKRQLGSEPDLLSNTRIQLQENVPPMSLHLALLRIAMPDASVLIDVLF
DTTDTDKNRSVFCHVVYDLTFANFLDVLQTNVRERFLGVFVKAYK
>Mature_525_residues
MNTNKPLRFFDFSSADNPLVEIQRRLGSQQSRYVSKYLNFLGAKKVLVEDNYFDRDYLNEFSAFYSLSAKGYPNICQRLH
FFSTMRLDRELFVSAVGGDESAIDELQNGYLGFIVVRPITDSPFGRTVLKWYPDQTPGTPRVTQPSRDYVCNVAGLEFCV
HGLAWQQQDSGVAACATIGIWSMLHSSAFNECNAIPTTSMITEAAHSSALVGRPPYPSHFLRIDQIQHAIIQLGFSPAIT
NGELVGQFFTTARFANTCAAYLRSGYPLLIGGVHGDGVPVGHAVCAVGFREPAPQQGGGIAEVSLQDDNISYLYIHDDNI
GPNVRFKLITQKVHEGTPEEFERCVMKMETPAYLNVGAAENLDNTTIIPQSIIAAVHPDLKITSDSFFRHGISLTGSLHA
ALKEYTEGMNIEPTSLVFSTRFVMLKDYLSIELKRQLGSEPDLLSNTRIQLQENVPPMSLHLALLRIAMPDASVLIDVLF
DTTDTDKNRSVFCHVVYDLTFANFLDVLQTNVRERFLGVFVKAYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58438; Mature: 58438

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNKPLRFFDFSSADNPLVEIQRRLGSQQSRYVSKYLNFLGAKKVLVEDNYFDRDYLNE
CCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
FSAFYSLSAKGYPNICQRLHFFSTMRLDRELFVSAVGGDESAIDELQNGYLGFIVVRPIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHEEECCCCHHHHHHHHCCCEEEEEEEECC
DSPFGRTVLKWYPDQTPGTPRVTQPSRDYVCNVAGLEFCVHGLAWQQQDSGVAACATIGI
CCCCCCCHHEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHH
WSMLHSSAFNECNAIPTTSMITEAAHSSALVGRPPYPSHFLRIDQIQHAIIQLGFSPAIT
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
NGELVGQFFTTARFANTCAAYLRSGYPLLIGGVHGDGVPVGHAVCAVGFREPAPQQGGGI
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCE
AEVSLQDDNISYLYIHDDNIGPNVRFKLITQKVHEGTPEEFERCVMKMETPAYLNVGAAE
EEEEEECCCEEEEEEECCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCCCEEECCCCC
NLDNTTIIPQSIIAAVHPDLKITSDSFFRHGISLTGSLHAALKEYTEGMNIEPTSLVFST
CCCCCEECHHHHHHHHCCCCEECCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
RFVMLKDYLSIELKRQLGSEPDLLSNTRIQLQENVPPMSLHLALLRIAMPDASVLIDVLF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHC
DTTDTDKNRSVFCHVVYDLTFANFLDVLQTNVRERFLGVFVKAYK
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTNKPLRFFDFSSADNPLVEIQRRLGSQQSRYVSKYLNFLGAKKVLVEDNYFDRDYLNE
CCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
FSAFYSLSAKGYPNICQRLHFFSTMRLDRELFVSAVGGDESAIDELQNGYLGFIVVRPIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHEEECCCCHHHHHHHHCCCEEEEEEEECC
DSPFGRTVLKWYPDQTPGTPRVTQPSRDYVCNVAGLEFCVHGLAWQQQDSGVAACATIGI
CCCCCCCHHEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHH
WSMLHSSAFNECNAIPTTSMITEAAHSSALVGRPPYPSHFLRIDQIQHAIIQLGFSPAIT
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
NGELVGQFFTTARFANTCAAYLRSGYPLLIGGVHGDGVPVGHAVCAVGFREPAPQQGGGI
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCE
AEVSLQDDNISYLYIHDDNIGPNVRFKLITQKVHEGTPEEFERCVMKMETPAYLNVGAAE
EEEEEECCCEEEEEEECCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCCCEEECCCCC
NLDNTTIIPQSIIAAVHPDLKITSDSFFRHGISLTGSLHAALKEYTEGMNIEPTSLVFST
CCCCCEECHHHHHHHHCCCCEECCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
RFVMLKDYLSIELKRQLGSEPDLLSNTRIQLQENVPPMSLHLALLRIAMPDASVLIDVLF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHC
DTTDTDKNRSVFCHVVYDLTFANFLDVLQTNVRERFLGVFVKAYK
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA