Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478361

Identifier: 113478361

GI number: 113478361

Start: 7701556

End: 7701783

Strand: Reverse

Name: 113478361

Synonym: Tery_5040

Alternate gene names: NA

Gene position: 7701783-7701556 (Counterclockwise)

Preceding gene: 113478362

Following gene: 113478360

Centisome position: 99.38

GC content: 39.47

Gene sequence:

>228_bases
ATGCCATATTCTAGTAGCTTGACAGATGAGGAGTGGGTTATAATTGAACCCCTGTTACCCAAAAAGAAAAGAACTAAACC
CCCCAAATGGACTAAAAGAGAAATATTGGATGGTGTTCTCTACCAACTTAAGAATGGTTGTAACTGGTGTGATTTACCCA
AGGATTTACCTCCTTATTCGACGGTATTTTGGCACTACAAACAATGGCGTATTGGAAGGGGTAATTGA

Upstream 100 bases:

>100_bases
AGAAAGTAATATGATCGAAATGTCTACCTAATATTTTATCCCCAGCTAGTTCTTATAGAAGCCATTTGGGATCTTTCTGA
AAGACTATAATGGATAGAAA

Downstream 100 bases:

>100_bases
GAAGATTAGAGATGTTTTACATGGACAACTGCGTCAAAAGGTAAAAAAAAAAGCGCTCCGGGACAACTTTAATCATCATT
GACTCACAAGCAGTCAAAAA

Product: IS5 family transposase

Products: NA

Alternate protein names: IS5 Family Transposase

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MPYSSSLTDEEWVIIEPLLPKKKRTKPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN

Sequences:

>Translated_75_residues
MPYSSSLTDEEWVIIEPLLPKKKRTKPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN
>Mature_74_residues
PYSSSLTDEEWVIIEPLLPKKKRTKPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYSTVFWHYKQWRIGRGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8991; Mature: 8859

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSSSLTDEEWVIIEPLLPKKKRTKPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYS
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TVFWHYKQWRIGRGN
CEEECCCCEECCCCC
>Mature Secondary Structure 
PYSSSLTDEEWVIIEPLLPKKKRTKPPKWTKREILDGVLYQLKNGCNWCDLPKDLPPYS
CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TVFWHYKQWRIGRGN
CEEECCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA