Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478270

Identifier: 113478270

GI number: 113478270

Start: 7533289

End: 7534653

Strand: Reverse

Name: 113478270

Synonym: Tery_4944

Alternate gene names: NA

Gene position: 7534653-7533289 (Counterclockwise)

Preceding gene: 113478271

Following gene: 113478269

Centisome position: 97.22

GC content: 28.79

Gene sequence:

>1365_bases
ATGACTATACTCAAAATACCTATATTTGCTCCCGATAGTAAATTTATTAGACTATGGGAAATATTAATTGTATTTATTAC
TGTTTATAATGCTTTTCTGATACCATTTAGAATTTCTTTTGAAAAAAGATTTTATGGCATCTGGATTTTATTAGATCTAA
TCGGAGACGTTATTCTAATCGCGGATATATTTCTTCGTTTCCATTTAGGTTACTTTGAGCATGGAGAATATGTTGAAGAT
AAAAAAAAGATAGCTCAACGTTACTTTTATAAACTTTTAAGAAGACATTTAATAGCTAGTTTTCCTGGAGATTTAATTGC
ACGAATTTTGCTACCAAATTCACTATTTATTATTGGGTTGTGTAGATGCCCTCGTTTATTACGCTTACCTCAGTTTTATC
GAATTTTTAATAGATGGGAAACTAATATTAATATTGAGCCTACCTTAATTAGAATGTGTAAGTTAATAATATTTATTGCT
TTAATTACTCATTGGGTAGCTTGTGGATGGTTTCTAATTGGTAGTTGGGAAAGTAATTTTGGAGAGTCTTGGTTAATTAA
TAAGTCCTTAAAATCAGTTGGTACAAGAACCCAATATATTAACTGTCTTTATTGGGCAATTACTACTTTAACTACTGTTG
GGTATGGAGATATTACACCCACTACAGAAATCGAAATAATATTCACATTAATGGTAATGTTTTTAGGGATATCTATGTAT
GCTTATACTATTGGTAATGTATCTTCATTAATTTCTAACTTAGATGCAGCTCAAGCCAGATATAGAGAAAAGTTACACCA
AATTAAAACCTATATGCGGGAAAACAAAATATCTCCGAAATTACAAAAAAAAATTAGAGACTACTATCAATATAAATGGA
TTGAAAATCGGGATATTAGAGATTATTATATAGTTGAAGAATTACCTCATCCTCTGAAAACTAAACTAGCACTGCAATTG
CATAAAGAGGTAATTGAAAAAGTGCCTATTTTTCAAGGCTCAACTTCACATTTTGTAGAAGAAATAGTAATAGCATTAAA
ACCAGAAATAGTACCACCTAATGAATATATAATTCGTGAAGGTAATTTGGGAAATGAAATGTATTTTATTAAGCGTGGGT
TAGTACAAGTTTTCTCAGAAAAAACTGGTTCTATATATAGAACTATGGAGGCAGGTACATTTTTTGGAGAAATTTCTCTA
GTATATGAAAAACGACGTACTGCATCAATTATCACATTAACTTACTGTGAATTATTTATTTTATACAAAAATGATTTTAA
AAAAGTATTAGAACATTATCCAGATTTTGCAGCTCATGTTAAAAAAATAGCTAAAGAACGTTATAAACTTGAAAATAAAG
AATAA

Upstream 100 bases:

>100_bases
AAAAATTTTAAGATATTAGTATAACTTTTAACTTTTGAGTTTTGACTTCTATAAAATAGTTAAAAATTATTAATACTTCC
TTGTCAGAAAACTTTGACTA

Downstream 100 bases:

>100_bases
CTATGCAACCATCAAAAAAAAGAACAATTAAGTATATTAAACAACCTACTTCTCAAATTTGGATAGACCAAGCGATCGCT
AATTTAGATATTATATTATT

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MTILKIPIFAPDSKFIRLWEILIVFITVYNAFLIPFRISFEKRFYGIWILLDLIGDVILIADIFLRFHLGYFEHGEYVED
KKKIAQRYFYKLLRRHLIASFPGDLIARILLPNSLFIIGLCRCPRLLRLPQFYRIFNRWETNINIEPTLIRMCKLIIFIA
LITHWVACGWFLIGSWESNFGESWLINKSLKSVGTRTQYINCLYWAITTLTTVGYGDITPTTEIEIIFTLMVMFLGISMY
AYTIGNVSSLISNLDAAQARYREKLHQIKTYMRENKISPKLQKKIRDYYQYKWIENRDIRDYYIVEELPHPLKTKLALQL
HKEVIEKVPIFQGSTSHFVEEIVIALKPEIVPPNEYIIREGNLGNEMYFIKRGLVQVFSEKTGSIYRTMEAGTFFGEISL
VYEKRRTASIITLTYCELFILYKNDFKKVLEHYPDFAAHVKKIAKERYKLENKE

Sequences:

>Translated_454_residues
MTILKIPIFAPDSKFIRLWEILIVFITVYNAFLIPFRISFEKRFYGIWILLDLIGDVILIADIFLRFHLGYFEHGEYVED
KKKIAQRYFYKLLRRHLIASFPGDLIARILLPNSLFIIGLCRCPRLLRLPQFYRIFNRWETNINIEPTLIRMCKLIIFIA
LITHWVACGWFLIGSWESNFGESWLINKSLKSVGTRTQYINCLYWAITTLTTVGYGDITPTTEIEIIFTLMVMFLGISMY
AYTIGNVSSLISNLDAAQARYREKLHQIKTYMRENKISPKLQKKIRDYYQYKWIENRDIRDYYIVEELPHPLKTKLALQL
HKEVIEKVPIFQGSTSHFVEEIVIALKPEIVPPNEYIIREGNLGNEMYFIKRGLVQVFSEKTGSIYRTMEAGTFFGEISL
VYEKRRTASIITLTYCELFILYKNDFKKVLEHYPDFAAHVKKIAKERYKLENKE
>Mature_453_residues
TILKIPIFAPDSKFIRLWEILIVFITVYNAFLIPFRISFEKRFYGIWILLDLIGDVILIADIFLRFHLGYFEHGEYVEDK
KKIAQRYFYKLLRRHLIASFPGDLIARILLPNSLFIIGLCRCPRLLRLPQFYRIFNRWETNINIEPTLIRMCKLIIFIAL
ITHWVACGWFLIGSWESNFGESWLINKSLKSVGTRTQYINCLYWAITTLTTVGYGDITPTTEIEIIFTLMVMFLGISMYA
YTIGNVSSLISNLDAAQARYREKLHQIKTYMRENKISPKLQKKIRDYYQYKWIENRDIRDYYIVEELPHPLKTKLALQLH
KEVIEKVPIFQGSTSHFVEEIVIALKPEIVPPNEYIIREGNLGNEMYFIKRGLVQVFSEKTGSIYRTMEAGTFFGEISLV
YEKRRTASIITLTYCELFILYKNDFKKVLEHYPDFAAHVKKIAKERYKLENKE

Specific function: Cyclic nucleotide-regulated potassium channel activated by cAMP [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI42718011, Length=453, Percent_Identity=33.112582781457, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI82617546, Length=453, Percent_Identity=29.8013245033113, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI120433600, Length=456, Percent_Identity=29.1666666666667, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI4502917, Length=456, Percent_Identity=29.1666666666667, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI71143141, Length=441, Percent_Identity=29.4784580498866, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI217035093, Length=441, Percent_Identity=29.4784580498866, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI13540549, Length=456, Percent_Identity=28.7280701754386, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI27886653, Length=458, Percent_Identity=28.82096069869, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI26051273, Length=457, Percent_Identity=28.0087527352298, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4557729, Length=457, Percent_Identity=28.0087527352298, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI156071470, Length=462, Percent_Identity=27.9220779220779, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI4885407, Length=462, Percent_Identity=27.4891774891775, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI116325989, Length=462, Percent_Identity=27.0562770562771, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI38327037, Length=462, Percent_Identity=26.1904761904762, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI26051271, Length=429, Percent_Identity=27.5058275058275, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI27886651, Length=441, Percent_Identity=26.7573696145125, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI4504831, Length=456, Percent_Identity=26.3157894736842, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI114205399, Length=447, Percent_Identity=28.1879194630872, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI27886648, Length=458, Percent_Identity=26.4192139737991, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI22024390, Length=458, Percent_Identity=26.2008733624454, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI116642889, Length=416, Percent_Identity=27.8846153846154, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI27437001, Length=483, Percent_Identity=25.2587991718427, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI38569493, Length=477, Percent_Identity=27.2536687631027, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI27886646, Length=397, Percent_Identity=25.6926952141058, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI27886667, Length=450, Percent_Identity=23.3333333333333, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI6912446, Length=458, Percent_Identity=24.235807860262, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI27886665, Length=310, Percent_Identity=31.6129032258064, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17556791, Length=424, Percent_Identity=30.188679245283, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI193205559, Length=460, Percent_Identity=28.4782608695652, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI193205557, Length=460, Percent_Identity=28.4782608695652, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17555416, Length=460, Percent_Identity=28.4782608695652, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI193205554, Length=460, Percent_Identity=28.4782608695652, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI193205550, Length=460, Percent_Identity=28.4782608695652, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI193205548, Length=460, Percent_Identity=28.4782608695652, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI193205546, Length=460, Percent_Identity=28.4782608695652, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI193205552, Length=460, Percent_Identity=28.4782608695652, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71985735, Length=467, Percent_Identity=26.338329764454, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71989969, Length=491, Percent_Identity=24.0325865580448, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17538726, Length=501, Percent_Identity=22.3552894211577, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17559702, Length=244, Percent_Identity=29.5081967213115, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI193207729, Length=244, Percent_Identity=29.5081967213115, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17544220, Length=283, Percent_Identity=24.3816254416961, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71988286, Length=269, Percent_Identity=22.6765799256506, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25144999, Length=112, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25145007, Length=112, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45549131, Length=458, Percent_Identity=31.2227074235808, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI45551460, Length=458, Percent_Identity=31.2227074235808, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI221330552, Length=449, Percent_Identity=29.3986636971047, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI221330550, Length=451, Percent_Identity=29.490022172949, Blast_Score=224, Evalue=9e-59,
Organism=Drosophila melanogaster, GI17137122, Length=435, Percent_Identity=30.1149425287356, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI85725018, Length=461, Percent_Identity=28.6334056399132, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI221330263, Length=461, Percent_Identity=28.6334056399132, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI85725022, Length=461, Percent_Identity=28.6334056399132, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI221330257, Length=466, Percent_Identity=28.3261802575107, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI221330259, Length=493, Percent_Identity=26.9776876267748, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI85725024, Length=498, Percent_Identity=26.7068273092369, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24762524, Length=454, Percent_Identity=26.431718061674, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI17136454, Length=454, Percent_Identity=26.431718061674, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI45550482, Length=449, Percent_Identity=27.1714922048998, Blast_Score=178, Evalue=8e-45,
Organism=Drosophila melanogaster, GI17136946, Length=454, Percent_Identity=27.3127753303965, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24642070, Length=455, Percent_Identity=24.3956043956044, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI116007160, Length=455, Percent_Identity=24.3956043956044, Blast_Score=152, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR013099
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF07885 Ion_trans_2 [H]

EC number: NA

Molecular weight: Translated: 53690; Mature: 53559

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00888 CNMP_BINDING_1 ; PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILKIPIFAPDSKFIRLWEILIVFITVYNAFLIPFRISFEKRFYGIWILLDLIGDVILI
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHH
ADIFLRFHLGYFEHGEYVEDKKKIAQRYFYKLLRRHLIASFPGDLIARILLPNSLFIIGL
HHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEHHH
CRCPRLLRLPQFYRIFNRWETNINIEPTLIRMCKLIIFIALITHWVACGWFLIGSWESNF
HHCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
GESWLINKSLKSVGTRTQYINCLYWAITTLTTVGYGDITPTTEIEIIFTLMVMFLGISMY
CCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AYTIGNVSSLISNLDAAQARYREKLHQIKTYMRENKISPKLQKKIRDYYQYKWIENRDIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
DYYIVEELPHPLKTKLALQLHKEVIEKVPIFQGSTSHFVEEIVIALKPEIVPPNEYIIRE
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEC
GNLGNEMYFIKRGLVQVFSEKTGSIYRTMEAGTFFGEISLVYEKRRTASIITLTYCELFI
CCCCCHHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHHHHCCCHHHEEHHHHHHHH
LYKNDFKKVLEHYPDFAAHVKKIAKERYKLENKE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TILKIPIFAPDSKFIRLWEILIVFITVYNAFLIPFRISFEKRFYGIWILLDLIGDVILI
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHH
ADIFLRFHLGYFEHGEYVEDKKKIAQRYFYKLLRRHLIASFPGDLIARILLPNSLFIIGL
HHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEHHH
CRCPRLLRLPQFYRIFNRWETNINIEPTLIRMCKLIIFIALITHWVACGWFLIGSWESNF
HHCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
GESWLINKSLKSVGTRTQYINCLYWAITTLTTVGYGDITPTTEIEIIFTLMVMFLGISMY
CCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AYTIGNVSSLISNLDAAQARYREKLHQIKTYMRENKISPKLQKKIRDYYQYKWIENRDIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
DYYIVEELPHPLKTKLALQLHKEVIEKVPIFQGSTSHFVEEIVIALKPEIVPPNEYIIRE
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEC
GNLGNEMYFIKRGLVQVFSEKTGSIYRTMEAGTFFGEISLVYEKRRTASIITLTYCELFI
CCCCCHHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHHHHCCCHHHEEHHHHHHHH
LYKNDFKKVLEHYPDFAAHVKKIAKERYKLENKE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA