| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478216
Identifier: 113478216
GI number: 113478216
Start: 7457169
End: 7457342
Strand: Reverse
Name: 113478216
Synonym: Tery_4872
Alternate gene names: NA
Gene position: 7457342-7457169 (Counterclockwise)
Preceding gene: 113478218
Following gene: 113478215
Centisome position: 96.22
GC content: 29.89
Gene sequence:
>174_bases ATGTTAAAGAAGAATTTGTTTGGTGATACCGAAGCTTATTTAATTTTTGATGACACAGTAATTAATAAAAAGTATGGGCA TAATATTGAGCTTGCACGACGACAATATAGTGGCAATGAACATCAAGTTGTTCATGGCATAGGAATAGTTAATTGTATAT ATTTTAATCGATGA
Upstream 100 bases:
>100_bases CAATAACGCTACGCCGCAAATCATCTGGACAATATTAGCCATGATACAATAAATCGCTATTTAAGATATTAGTCTTTAAA TTCAGAAGGTTTATGGCGAA
Downstream 100 bases:
>100_bases ATGAACAATTATGGATTATAGATTATAGGATTTATGACCCAGATACTGACAAGAAAACAAAAATAGAAGAGTGTTGAAGA AATGATACTTAATGCTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR
Sequences:
>Translated_57_residues MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR >Mature_57_residues MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6658; Mature: 6658
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR CCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECC >Mature Secondary Structure MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR CCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA