Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478216

Identifier: 113478216

GI number: 113478216

Start: 7457169

End: 7457342

Strand: Reverse

Name: 113478216

Synonym: Tery_4872

Alternate gene names: NA

Gene position: 7457342-7457169 (Counterclockwise)

Preceding gene: 113478218

Following gene: 113478215

Centisome position: 96.22

GC content: 29.89

Gene sequence:

>174_bases
ATGTTAAAGAAGAATTTGTTTGGTGATACCGAAGCTTATTTAATTTTTGATGACACAGTAATTAATAAAAAGTATGGGCA
TAATATTGAGCTTGCACGACGACAATATAGTGGCAATGAACATCAAGTTGTTCATGGCATAGGAATAGTTAATTGTATAT
ATTTTAATCGATGA

Upstream 100 bases:

>100_bases
CAATAACGCTACGCCGCAAATCATCTGGACAATATTAGCCATGATACAATAAATCGCTATTTAAGATATTAGTCTTTAAA
TTCAGAAGGTTTATGGCGAA

Downstream 100 bases:

>100_bases
ATGAACAATTATGGATTATAGATTATAGGATTTATGACCCAGATACTGACAAGAAAACAAAAATAGAAGAGTGTTGAAGA
AATGATACTTAATGCTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR

Sequences:

>Translated_57_residues
MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR
>Mature_57_residues
MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6658; Mature: 6658

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR
CCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECC
>Mature Secondary Structure
MLKKNLFGDTEAYLIFDDTVINKKYGHNIELARRQYSGNEHQVVHGIGIVNCIYFNR
CCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA