| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478180
Identifier: 113478180
GI number: 113478180
Start: 7419053
End: 7419199
Strand: Reverse
Name: 113478180
Synonym: Tery_4824
Alternate gene names: NA
Gene position: 7419199-7419053 (Counterclockwise)
Preceding gene: 113478187
Following gene: 113478174
Centisome position: 95.73
GC content: 26.53
Gene sequence:
>147_bases ATGATGCTTAATGCTATAAATAATAAGAAAATACCATTTAAAACAGTATTAATGGATAGTTGGTATGCAACACAAAGATT AATGGGATTAATAGATAATGATAGAAAAAATTATTATTGTCCTTTAAAAAGTAATCGCGCGCGTTGA
Upstream 100 bases:
>100_bases TATATATTTTAATCGAGGAATGAACAATTATGGATTATAGATTATAGGATTTATGACCCAGATACTGATAAGAAAACAAA AATAGAAGAGTGTTGAAGAA
Downstream 100 bases:
>100_bases TGATACAGGTCGCGATCGAAAAATACAAAAAAGTTCAAGATTTAAATTGGAATGAAGCTGAAAAAAAATCAGGAAAAATA ATTAAAATTAAAGGGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MMLNAINNKKIPFKTVLMDSWYATQRLMGLIDNDRKNYYCPLKSNRAR
Sequences:
>Translated_48_residues MMLNAINNKKIPFKTVLMDSWYATQRLMGLIDNDRKNYYCPLKSNRAR >Mature_48_residues MMLNAINNKKIPFKTVLMDSWYATQRLMGLIDNDRKNYYCPLKSNRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5738; Mature: 5738
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNAINNKKIPFKTVLMDSWYATQRLMGLIDNDRKNYYCPLKSNRAR CCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MMLNAINNKKIPFKTVLMDSWYATQRLMGLIDNDRKNYYCPLKSNRAR CCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA