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The map label for this gene is selD [H]

Identifier: 113478148

GI number: 113478148

Start: 7352883

End: 7355186

Strand: Reverse

Name: selD [H]

Synonym: Tery_4785

Alternate gene names: 113478148

Gene position: 7355186-7352883 (Counterclockwise)

Preceding gene: 113478151

Following gene: 113478143

Centisome position: 94.9

GC content: 41.67

Gene sequence:

>2304_bases
ATGAAATTCCCTATACCACCAAAAACAGATTTAGTCCTAATAGGAGGCGGTCATAGCCATGCGATCGCTCTCCGAAAATT
TGCCATGAACCCTATACCAGGGGTTAGACTAACCCTAATCACAGATGTATATCACACTCCTTACTCTGGAATGTTACCAG
GATATGTGGCAGGTTTATACAACTTCGATCAATGTCACATAGATCTACTCCCCCTCGCCAAATTTGCTGGGGCTAGAATA
TTTTTAAGCCACGCTATAGGTCTAGACCTGGAGAAAAATCAGATACTTTGCACTAGTCGTCCCCCTGTAAATTTCGATTT
ACTTTCTATTGATATTGGTAGCACTCCCGCTAGTTTAACTGTACCGGGGGCAATAGAATATGCTATTGCGGTTAAACCAA
TATCAAAATTTCTCACCTATTGGGATAAAATAACTACAATGATTTCCAAATCTCCAACACAGAAAACGCGGATCGCAATA
GTGGGTGGTGGTGCTGGGGGGGTAGAGTTAGCTTTCGCGGTTCAAAGTCATCTCCATCAGATTTATCGCAATGCTAAACA
ACCTACTGATAATTTGGAATTGCATCTATTTCATAGAGGGAAGAGATTATTACCACAGCGTCATCATTGGGTAGGAAAGG
AAGTTGAGAAAATTCTTAAAAGTCGCGGTGTGCTATTGCATTTAAAGGAAAGTGTTGAGGAGGTTAGGGGTGATGACCAG
GAGCTTCCCACGAATGTAGAGGGAAATAAAACATTCCATTCTTTATACTCTACTCTCAAAATGATTTGTTGTGCTTCAGG
GTTGGAAATAGAGTGTGATATTCTGTTTTGGGTGACTCAAGCATCGGCCTCTCCTTGGTTACAAAAAGCAGGTTTGGCAA
CAGATACCAGAGGTTTTGTTTTGGTTAATGAGAAATTACAGTCAATTTCTCATCCTCAAGTCTTTGCGGCCGGAGATGTG
GCAACAATAATCAATCATTCTCGCCCCAAAGCTGGAGTGTTTGCGGTGCGACAGGGACAACCTTTGTTTGAAAATCTACA
ACGGGCTCTTAAGAAAAAATTGCTGAAGTCATTTATACCTCAGAAAAAGTTCTTGATTTTAATTGGTACTGGTGATGAAC
GGGCGATCGCTTCCCGTGGCAGAATAGGTTTTGGTCCTCATAAGTTACTTTGGCGTTGGAAAAACCGCATTGACCGTAAA
TTTATGGCTCAATTCTCTAATCTAAAAATGGAAGACAGAACGCAGAAGGCAGAAGACAGAAAACAAGATTCCCAAATGTA
CTGTGCTGGTTGTGGAGCAAAAGTTACTAGTAGGGTTTTGGAAAATGTGCTGCATAAAATTCCACAGGAAATCAGGAGGG
ATGATATTTTGATTGGTATGGATACACCTGATGATGCTGCAGTGATTAGGGTACCAGCGGATAGGGTAATGGTACAGACG
ATCGATTATTTTCGAGGGTTGCTTGATGACCCCTATTTGTTGGGAAAAATTACGGCTAATCATTGTTTGAGTGATTTATT
TGCTATGGGGGCAATGGCTCAGAGTGGGTTAGCGATCGCTACTATTCCCTACGCTGCCCCAAGTAAACAGGAGGATACTT
TATATCAATTGTTATTGGGAGCAACGGAAGTTTTGAATCAATCTGGTGCTGTTCTGATAGGTGGTCATACAACAGAGGGA
GAAGAGCTGGCTTTTGGTCTCACCTGTAATGGTTTAGTGTCACAAAAAAAACTATTGTACAAGGGAGGGATGCAACCGGG
GGATATGCTGATATTAACGAAAGCTTTGGGAACAGGGACGTTATTTGCTGCAGATATGCGTCTGAAGGCAAGGGGGCGTT
GGATTGAAAGTGCTATTAAGTCAATGTTGGGTTCTAATCAGAATGCTGCACAGTTATTATTAGAGTATGGTGTTACTGCT
TGTACGGATGTGACTGGATTTGGATTAGTCGGACATTTGTTGGAAATGTTAAAAGGGCAAAGAGTGGGCGTGGAATTGGA
TATGGAAGCTATTCCTGTGTTGCCAGGTGTAGCTGAAACTTTGGAACAAGGTATTTTTAGTTCTCTTTATCCGGGAAATT
TGCAAATGTCTGCATCAATTCAAAATCGTGAACAAGCGAGTATGTATCCTCTTTATCCTCTGTTGTTTGACCCGCAAACT
TCTGGTGGGTTGCTTGCTACAGTGCCAGCTAATTTAGCGAGTGCTTGTTTGAATGCGCTACAACAGGAGTATTTTGAAAC
TAGAATTATTGGGCGAGTATTATTGTTAGATACAGGGATGCTGCCCATTAGAATTCATTTTTGA

Upstream 100 bases:

>100_bases
ATGAATAAACACAGATTATTCAAATAGATAAAATTCAAATATATTTGCTCAAATCATCTATTCTGAAAATCAACAAAATG
TTTTAATACTATAAATAATA

Downstream 100 bases:

>100_bases
GCCTGTGGCAACCAATATCATTTTTAAAAAACTTTTCTATTTGGCACTTTGATCAGGGGATCTACTATTGCTCCCCTCCC
ACCAAAGGGATAAGGTAGGG

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MKFPIPPKTDLVLIGGGHSHAIALRKFAMNPIPGVRLTLITDVYHTPYSGMLPGYVAGLYNFDQCHIDLLPLAKFAGARI
FLSHAIGLDLEKNQILCTSRPPVNFDLLSIDIGSTPASLTVPGAIEYAIAVKPISKFLTYWDKITTMISKSPTQKTRIAI
VGGGAGGVELAFAVQSHLHQIYRNAKQPTDNLELHLFHRGKRLLPQRHHWVGKEVEKILKSRGVLLHLKESVEEVRGDDQ
ELPTNVEGNKTFHSLYSTLKMICCASGLEIECDILFWVTQASASPWLQKAGLATDTRGFVLVNEKLQSISHPQVFAAGDV
ATIINHSRPKAGVFAVRQGQPLFENLQRALKKKLLKSFIPQKKFLILIGTGDERAIASRGRIGFGPHKLLWRWKNRIDRK
FMAQFSNLKMEDRTQKAEDRKQDSQMYCAGCGAKVTSRVLENVLHKIPQEIRRDDILIGMDTPDDAAVIRVPADRVMVQT
IDYFRGLLDDPYLLGKITANHCLSDLFAMGAMAQSGLAIATIPYAAPSKQEDTLYQLLLGATEVLNQSGAVLIGGHTTEG
EELAFGLTCNGLVSQKKLLYKGGMQPGDMLILTKALGTGTLFAADMRLKARGRWIESAIKSMLGSNQNAAQLLLEYGVTA
CTDVTGFGLVGHLLEMLKGQRVGVELDMEAIPVLPGVAETLEQGIFSSLYPGNLQMSASIQNREQASMYPLYPLLFDPQT
SGGLLATVPANLASACLNALQQEYFETRIIGRVLLLDTGMLPIRIHF

Sequences:

>Translated_767_residues
MKFPIPPKTDLVLIGGGHSHAIALRKFAMNPIPGVRLTLITDVYHTPYSGMLPGYVAGLYNFDQCHIDLLPLAKFAGARI
FLSHAIGLDLEKNQILCTSRPPVNFDLLSIDIGSTPASLTVPGAIEYAIAVKPISKFLTYWDKITTMISKSPTQKTRIAI
VGGGAGGVELAFAVQSHLHQIYRNAKQPTDNLELHLFHRGKRLLPQRHHWVGKEVEKILKSRGVLLHLKESVEEVRGDDQ
ELPTNVEGNKTFHSLYSTLKMICCASGLEIECDILFWVTQASASPWLQKAGLATDTRGFVLVNEKLQSISHPQVFAAGDV
ATIINHSRPKAGVFAVRQGQPLFENLQRALKKKLLKSFIPQKKFLILIGTGDERAIASRGRIGFGPHKLLWRWKNRIDRK
FMAQFSNLKMEDRTQKAEDRKQDSQMYCAGCGAKVTSRVLENVLHKIPQEIRRDDILIGMDTPDDAAVIRVPADRVMVQT
IDYFRGLLDDPYLLGKITANHCLSDLFAMGAMAQSGLAIATIPYAAPSKQEDTLYQLLLGATEVLNQSGAVLIGGHTTEG
EELAFGLTCNGLVSQKKLLYKGGMQPGDMLILTKALGTGTLFAADMRLKARGRWIESAIKSMLGSNQNAAQLLLEYGVTA
CTDVTGFGLVGHLLEMLKGQRVGVELDMEAIPVLPGVAETLEQGIFSSLYPGNLQMSASIQNREQASMYPLYPLLFDPQT
SGGLLATVPANLASACLNALQQEYFETRIIGRVLLLDTGMLPIRIHF
>Mature_767_residues
MKFPIPPKTDLVLIGGGHSHAIALRKFAMNPIPGVRLTLITDVYHTPYSGMLPGYVAGLYNFDQCHIDLLPLAKFAGARI
FLSHAIGLDLEKNQILCTSRPPVNFDLLSIDIGSTPASLTVPGAIEYAIAVKPISKFLTYWDKITTMISKSPTQKTRIAI
VGGGAGGVELAFAVQSHLHQIYRNAKQPTDNLELHLFHRGKRLLPQRHHWVGKEVEKILKSRGVLLHLKESVEEVRGDDQ
ELPTNVEGNKTFHSLYSTLKMICCASGLEIECDILFWVTQASASPWLQKAGLATDTRGFVLVNEKLQSISHPQVFAAGDV
ATIINHSRPKAGVFAVRQGQPLFENLQRALKKKLLKSFIPQKKFLILIGTGDERAIASRGRIGFGPHKLLWRWKNRIDRK
FMAQFSNLKMEDRTQKAEDRKQDSQMYCAGCGAKVTSRVLENVLHKIPQEIRRDDILIGMDTPDDAAVIRVPADRVMVQT
IDYFRGLLDDPYLLGKITANHCLSDLFAMGAMAQSGLAIATIPYAAPSKQEDTLYQLLLGATEVLNQSGAVLIGGHTTEG
EELAFGLTCNGLVSQKKLLYKGGMQPGDMLILTKALGTGTLFAADMRLKARGRWIESAIKSMLGSNQNAAQLLLEYGVTA
CTDVTGFGLVGHLLEMLKGQRVGVELDMEAIPVLPGVAETLEQGIFSSLYPGNLQMSASIQNREQASMYPLYPLLFDPQT
SGGLLATVPANLASACLNALQQEYFETRIIGRVLLLDTGMLPIRIHF

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=331, Percent_Identity=26.8882175226586, Blast_Score=104, Evalue=4e-22,
Organism=Homo sapiens, GI15011844, Length=254, Percent_Identity=26.7716535433071, Blast_Score=89, Evalue=1e-17,
Organism=Escherichia coli, GI1788062, Length=301, Percent_Identity=35.5481727574751, Blast_Score=164, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17543426, Length=274, Percent_Identity=29.5620437956204, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24653602, Length=297, Percent_Identity=27.6094276094276, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24653604, Length=297, Percent_Identity=27.6094276094276, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI28574119, Length=329, Percent_Identity=27.9635258358663, Blast_Score=97, Evalue=6e-20,
Organism=Drosophila melanogaster, GI28574118, Length=257, Percent_Identity=28.7937743190661, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 84279; Mature: 84279

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPIPPKTDLVLIGGGHSHAIALRKFAMNPIPGVRLTLITDVYHTPYSGMLPGYVAGLY
CCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHC
NFDQCHIDLLPLAKFAGARIFLSHAIGLDLEKNQILCTSRPPVNFDLLSIDIGSTPASLT
CCCCCEEEEEHHHHHCCCCEEEEHHHCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEE
VPGAIEYAIAVKPISKFLTYWDKITTMISKSPTQKTRIAIVGGGAGGVELAFAVQSHLHQ
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
IYRNAKQPTDNLELHLFHRGKRLLPQRHHWVGKEVEKILKSRGVLLHLKESVEEVRGDDQ
HHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCC
ELPTNVEGNKTFHSLYSTLKMICCASGLEIECDILFWVTQASASPWLQKAGLATDTRGFV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHCCCCCCCCCEE
LVNEKLQSISHPQVFAAGDVATIINHSRPKAGVFAVRQGQPLFENLQRALKKKLLKSFIP
EECHHHHCCCCCCEEECCCHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
QKKFLILIGTGDERAIASRGRIGFGPHKLLWRWKNRIDRKFMAQFSNLKMEDRTQKAEDR
CCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KQDSQMYCAGCGAKVTSRVLENVLHKIPQEIRRDDILIGMDTPDDAAVIRVPADRVMVQT
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHHH
IDYFRGLLDDPYLLGKITANHCLSDLFAMGAMAQSGLAIATIPYAAPSKQEDTLYQLLLG
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
ATEVLNQSGAVLIGGHTTEGEELAFGLTCNGLVSQKKLLYKGGMQPGDMLILTKALGTGT
HHHHHCCCCCEEECCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCE
LFAADMRLKARGRWIESAIKSMLGSNQNAAQLLLEYGVTACTDVTGFGLVGHLLEMLKGQ
EEEECEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCC
RVGVELDMEAIPVLPGVAETLEQGIFSSLYPGNLQMSASIQNREQASMYPLYPLLFDPQT
CCCEEECCHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCC
SGGLLATVPANLASACLNALQQEYFETRIIGRVLLLDTGMLPIRIHF
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC
>Mature Secondary Structure
MKFPIPPKTDLVLIGGGHSHAIALRKFAMNPIPGVRLTLITDVYHTPYSGMLPGYVAGLY
CCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHC
NFDQCHIDLLPLAKFAGARIFLSHAIGLDLEKNQILCTSRPPVNFDLLSIDIGSTPASLT
CCCCCEEEEEHHHHHCCCCEEEEHHHCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEE
VPGAIEYAIAVKPISKFLTYWDKITTMISKSPTQKTRIAIVGGGAGGVELAFAVQSHLHQ
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
IYRNAKQPTDNLELHLFHRGKRLLPQRHHWVGKEVEKILKSRGVLLHLKESVEEVRGDDQ
HHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCC
ELPTNVEGNKTFHSLYSTLKMICCASGLEIECDILFWVTQASASPWLQKAGLATDTRGFV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHCCCCCCCCCEE
LVNEKLQSISHPQVFAAGDVATIINHSRPKAGVFAVRQGQPLFENLQRALKKKLLKSFIP
EECHHHHCCCCCCEEECCCHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
QKKFLILIGTGDERAIASRGRIGFGPHKLLWRWKNRIDRKFMAQFSNLKMEDRTQKAEDR
CCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KQDSQMYCAGCGAKVTSRVLENVLHKIPQEIRRDDILIGMDTPDDAAVIRVPADRVMVQT
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHHH
IDYFRGLLDDPYLLGKITANHCLSDLFAMGAMAQSGLAIATIPYAAPSKQEDTLYQLLLG
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
ATEVLNQSGAVLIGGHTTEGEELAFGLTCNGLVSQKKLLYKGGMQPGDMLILTKALGTGT
HHHHHCCCCCEEECCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCE
LFAADMRLKARGRWIESAIKSMLGSNQNAAQLLLEYGVTACTDVTGFGLVGHLLEMLKGQ
EEEECEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCC
RVGVELDMEAIPVLPGVAETLEQGIFSSLYPGNLQMSASIQNREQASMYPLYPLLFDPQT
CCCEEECCHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCC
SGGLLATVPANLASACLNALQQEYFETRIIGRVLLLDTGMLPIRIHF
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA