Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478143

Identifier: 113478143

GI number: 113478143

Start: 7341109

End: 7341258

Strand: Reverse

Name: 113478143

Synonym: Tery_4778

Alternate gene names: NA

Gene position: 7341258-7341109 (Counterclockwise)

Preceding gene: 113478148

Following gene: 113478142

Centisome position: 94.72

GC content: 30.0

Gene sequence:

>150_bases
ATGCAACAGGTATTTACAGATAGCTATGCATTGCAATACAGAAATATATGTCTTATTTCTGGTACTAATAAAACTCCGTT
TATCACTTTACGTTTAATTGAAATTAGGTCAGGAAAAACATGGAATTCTTATTTAACCAGTGTCCTATAA

Upstream 100 bases:

>100_bases
TGTTATATATAGGGTTGTATTACTTTAATTTTTGGTTAAAATTAATAGATAAAAAAGTGTATTTTATTACTGACAAAAAA
AGGGGGGATAGCAGTTCCCT

Downstream 100 bases:

>100_bases
CCTTATACTTTACCCCCTTATATAGTAGCAGATTTATATTGGTGGCGTTGGAAAATTGAAGATGCTTTTGATACTGTCAA
AATACTCTTTAATTTATATT

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MQQVFTDSYALQYRNICLISGTNKTPFITLRLIEIRSGKTWNSYLTSVL

Sequences:

>Translated_49_residues
MQQVFTDSYALQYRNICLISGTNKTPFITLRLIEIRSGKTWNSYLTSVL
>Mature_49_residues
MQQVFTDSYALQYRNICLISGTNKTPFITLRLIEIRSGKTWNSYLTSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5686; Mature: 5686

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVFTDSYALQYRNICLISGTNKTPFITLRLIEIRSGKTWNSYLTSVL
CCCCCCCCEEEEECCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure
MQQVFTDSYALQYRNICLISGTNKTPFITLRLIEIRSGKTWNSYLTSVL
CCCCCCCCEEEEECCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA