Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477956

Identifier: 113477956

GI number: 113477956

Start: 7027790

End: 7028110

Strand: Reverse

Name: 113477956

Synonym: Tery_4568

Alternate gene names: NA

Gene position: 7028110-7027790 (Counterclockwise)

Preceding gene: 113477957

Following gene: 113477955

Centisome position: 90.68

GC content: 23.36

Gene sequence:

>321_bases
ATGGTTTTAAATATTGAAAATATATTACTGCCTCCCACATCTGAAATATTACCAAATTTATTTGCACTGAATTATGAATT
ATTTTTATATATTGCTCTTTTTAGTAAAAGTAAAACACTGTCTAAAAATAGATTGTATATTGTAAAAATGCAATATTTGA
AACAGCTTGTGAAAGTATCTAAAATTCTGAATTACTCAGATAAATACAATAAACAAAAATTCATTTATCAGTTACTAAAC
CCAAGTTTTCATAAATACCTAAATAGTCTTTGTTACTTGGAAAAAGTTGATAAACTTTCTCAATTTATGATAGCTGTTTA
A

Upstream 100 bases:

>100_bases
AAGATATTGCTACTCCTAAAATAGCCAGATTAGCTAGAAAAAAAACTTGAAAATATGAGAAATTTTTCCCTGTATTTGAG
AAATATTATAAGCATCATTC

Downstream 100 bases:

>100_bases
ATATTTAGCTGAGAGTATTTATTAAGCAAGTAATAAGGAAGACCAGAGAAACAAGAATAAAAAAATTGAATCAGGATTAA
AAGATAAAATTAATGAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MVLNIENILLPPTSEILPNLFALNYELFLYIALFSKSKTLSKNRLYIVKMQYLKQLVKVSKILNYSDKYNKQKFIYQLLN
PSFHKYLNSLCYLEKVDKLSQFMIAV

Sequences:

>Translated_106_residues
MVLNIENILLPPTSEILPNLFALNYELFLYIALFSKSKTLSKNRLYIVKMQYLKQLVKVSKILNYSDKYNKQKFIYQLLN
PSFHKYLNSLCYLEKVDKLSQFMIAV
>Mature_106_residues
MVLNIENILLPPTSEILPNLFALNYELFLYIALFSKSKTLSKNRLYIVKMQYLKQLVKVSKILNYSDKYNKQKFIYQLLN
PSFHKYLNSLCYLEKVDKLSQFMIAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12591; Mature: 12591

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNIENILLPPTSEILPNLFALNYELFLYIALFSKSKTLSKNRLYIVKMQYLKQLVKVS
CEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHH
KILNYSDKYNKQKFIYQLLNPSFHKYLNSLCYLEKVDKLSQFMIAV
HHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLNIENILLPPTSEILPNLFALNYELFLYIALFSKSKTLSKNRLYIVKMQYLKQLVKVS
CEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHH
KILNYSDKYNKQKFIYQLLNPSFHKYLNSLCYLEKVDKLSQFMIAV
HHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA