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The map label for this gene is ctpA [H]

Identifier: 113477914

GI number: 113477914

Start: 6972389

End: 6973681

Strand: Reverse

Name: ctpA [H]

Synonym: Tery_4518

Alternate gene names: 113477914

Gene position: 6973681-6972389 (Counterclockwise)

Preceding gene: 113477915

Following gene: 113477912

Centisome position: 89.98

GC content: 38.75

Gene sequence:

>1293_bases
ATGGTTATAGCAAAACGTGGACTTATCCTTGGTGTAACAGCATTAATGTTAACAGGCGTCACTGTAATTGGCGCTGGTAT
TCATCTTTCCTCTCAAGCATCATTAAGTAATAATGCTCCGAAAGAATTAATCGACGAAGTTTGGCAAATTATTGATAAAA
CTTATGTAGATGGTACTTTCAATCAAGTAGACTGGAAAGCAACTCGCAACGAGTATCTTGATAAAACATATACCAGTGAA
GAACAAGCTTATGATGCGATTAAGGAAATGCTAAAAAAGTTAGACGATCCTTACACCCGCTTTATGGATCCCGAAGAGTT
TAAAAATATGCAAATAGATACTTCTGGGGAACTAACAGGTGTAGGTATTCAGCTAACCCAAGACCCAGATTCAAAAAAAT
TGGTAGTTATTTCACCAATAGAAGATACTCCAGCTTTTGATGCAGGTATTCAAGCTAAGGATATTATTAGCAAAATTGAC
GGTCAAAGCACTAAGGGAATGAATATTAATGAGGCGGTAAGTCTGATTCGCGGTCCAATTGGTAGTCAAGTAATTTTAAC
TATTAAACGAGAAAATCTGGAAATAGAGTTTCCTATTGTTCGGGCAAAAATTGAAATTCATCCTGTTAAGTATTCTCAGA
AAGAGAGTTACAATTCTTTAGGCAAAGTTGGTTATATTCGCTTAAGCCAATTTAGTGCGAATGCTGCTGGTGAGATGCGA
GAGGCAATAGGTAATTTGGAAACTCAGAAGGTATCAGGTTATATTCTGGATTTACGTTCTAATCCTGGTGGATTGCTATA
TGCTAGCATAGAAATTGCTAGGATGTGGCTAAAGCGGGGAGATATTGTTTCCACGGTAGACCGCAATGGTGTCACTGATC
GCCAAAAGGCTAATAATAGGTCTTTGACAGATAAGCCTTTGGTGGTTATGGTAGATGGGGGGTCTGCAAGTGCCAGTGAG
ATTCTTTCTGGTGCACTGCAAGATAACAAGCGAGCGACATTAGTCGGGACAAAGACTTTTGGTAAAGGGTTAGTGCAGTC
AGTGCGTAGTGTTGGTAAGGGTGCAGGGATAGCGGTGACGATCGCTAAATACTTTACCCCTAATGGTCGCGATATTAACA
AATTGGGAATTCAACCAGATGTAAAAATACCCCTGAGTGAAAAACAAAAAGAAACTTTGCAAAAAAATCGTGACAAAATA
GGTACTATAGAAGCAGATCCTCAATACGCAAAAGCATTAGACATCTTAAATAAAGAAATTGCTGAATTCCAAAATCAGAC
AGCTCAGTGGTAG

Upstream 100 bases:

>100_bases
CAAAGAGAAGTGCTTCTAGGCAATAGTTACATATGCTAAATTAGGTTTAGCCTAGATGTAGTAATTATTGTTTAAATTCA
TTCAACATTCAACAAACAAA

Downstream 100 bases:

>100_bases
CCATACTGGCATTAGGGTACATAAGCTGTTGGCTATAATCTGGTATAATCTATAATCAGATGTAATTATCTTTATTTGTG
CTGCTTGAATTGAAAACTGA

Product: C-terminal processing peptidase-2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MVIAKRGLILGVTALMLTGVTVIGAGIHLSSQASLSNNAPKELIDEVWQIIDKTYVDGTFNQVDWKATRNEYLDKTYTSE
EQAYDAIKEMLKKLDDPYTRFMDPEEFKNMQIDTSGELTGVGIQLTQDPDSKKLVVISPIEDTPAFDAGIQAKDIISKID
GQSTKGMNINEAVSLIRGPIGSQVILTIKRENLEIEFPIVRAKIEIHPVKYSQKESYNSLGKVGYIRLSQFSANAAGEMR
EAIGNLETQKVSGYILDLRSNPGGLLYASIEIARMWLKRGDIVSTVDRNGVTDRQKANNRSLTDKPLVVMVDGGSASASE
ILSGALQDNKRATLVGTKTFGKGLVQSVRSVGKGAGIAVTIAKYFTPNGRDINKLGIQPDVKIPLSEKQKETLQKNRDKI
GTIEADPQYAKALDILNKEIAEFQNQTAQW

Sequences:

>Translated_430_residues
MVIAKRGLILGVTALMLTGVTVIGAGIHLSSQASLSNNAPKELIDEVWQIIDKTYVDGTFNQVDWKATRNEYLDKTYTSE
EQAYDAIKEMLKKLDDPYTRFMDPEEFKNMQIDTSGELTGVGIQLTQDPDSKKLVVISPIEDTPAFDAGIQAKDIISKID
GQSTKGMNINEAVSLIRGPIGSQVILTIKRENLEIEFPIVRAKIEIHPVKYSQKESYNSLGKVGYIRLSQFSANAAGEMR
EAIGNLETQKVSGYILDLRSNPGGLLYASIEIARMWLKRGDIVSTVDRNGVTDRQKANNRSLTDKPLVVMVDGGSASASE
ILSGALQDNKRATLVGTKTFGKGLVQSVRSVGKGAGIAVTIAKYFTPNGRDINKLGIQPDVKIPLSEKQKETLQKNRDKI
GTIEADPQYAKALDILNKEIAEFQNQTAQW
>Mature_430_residues
MVIAKRGLILGVTALMLTGVTVIGAGIHLSSQASLSNNAPKELIDEVWQIIDKTYVDGTFNQVDWKATRNEYLDKTYTSE
EQAYDAIKEMLKKLDDPYTRFMDPEEFKNMQIDTSGELTGVGIQLTQDPDSKKLVVISPIEDTPAFDAGIQAKDIISKID
GQSTKGMNINEAVSLIRGPIGSQVILTIKRENLEIEFPIVRAKIEIHPVKYSQKESYNSLGKVGYIRLSQFSANAAGEMR
EAIGNLETQKVSGYILDLRSNPGGLLYASIEIARMWLKRGDIVSTVDRNGVTDRQKANNRSLTDKPLVVMVDGGSASASE
ILSGALQDNKRATLVGTKTFGKGLVQSVRSVGKGAGIAVTIAKYFTPNGRDINKLGIQPDVKIPLSEKQKETLQKNRDKI
GTIEADPQYAKALDILNKEIAEFQNQTAQW

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=330, Percent_Identity=32.1212121212121, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47209; Mature: 47209

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIAKRGLILGVTALMLTGVTVIGAGIHLSSQASLSNNAPKELIDEVWQIIDKTYVDGTF
CEEECCCHHHHHHHHHHHCHHHEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
NQVDWKATRNEYLDKTYTSEEQAYDAIKEMLKKLDDPYTRFMDPEEFKNMQIDTSGELTG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCEEECCCCCEEE
VGIQLTQDPDSKKLVVISPIEDTPAFDAGIQAKDIISKIDGQSTKGMNINEAVSLIRGPI
EEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
GSQVILTIKRENLEIEFPIVRAKIEIHPVKYSQKESYNSLGKVGYIRLSQFSANAAGEMR
CCEEEEEEEECCEEEEEEEEEEEEEEEECCCCCHHHHHHCCCEEEEEEECCCCCCHHHHH
EAIGNLETQKVSGYILDLRSNPGGLLYASIEIARMWLKRGDIVSTVDRNGVTDRQKANNR
HHHCCCCCEEECEEEEEEECCCCCEEEEHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCC
SLTDKPLVVMVDGGSASASEILSGALQDNKRATLVGTKTFGKGLVQSVRSVGKGAGIAVT
CCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEE
IAKYFTPNGRDINKLGIQPDVKIPLSEKQKETLQKNRDKIGTIEADPQYAKALDILNKEI
EEEHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AEFQNQTAQW
HHHHHHCCCC
>Mature Secondary Structure
MVIAKRGLILGVTALMLTGVTVIGAGIHLSSQASLSNNAPKELIDEVWQIIDKTYVDGTF
CEEECCCHHHHHHHHHHHCHHHEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
NQVDWKATRNEYLDKTYTSEEQAYDAIKEMLKKLDDPYTRFMDPEEFKNMQIDTSGELTG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCEEECCCCCEEE
VGIQLTQDPDSKKLVVISPIEDTPAFDAGIQAKDIISKIDGQSTKGMNINEAVSLIRGPI
EEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
GSQVILTIKRENLEIEFPIVRAKIEIHPVKYSQKESYNSLGKVGYIRLSQFSANAAGEMR
CCEEEEEEEECCEEEEEEEEEEEEEEEECCCCCHHHHHHCCCEEEEEEECCCCCCHHHHH
EAIGNLETQKVSGYILDLRSNPGGLLYASIEIARMWLKRGDIVSTVDRNGVTDRQKANNR
HHHCCCCCEEECEEEEEEECCCCCEEEEHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCC
SLTDKPLVVMVDGGSASASEILSGALQDNKRATLVGTKTFGKGLVQSVRSVGKGAGIAVT
CCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEE
IAKYFTPNGRDINKLGIQPDVKIPLSEKQKETLQKNRDKIGTIEADPQYAKALDILNKEI
EEEHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AEFQNQTAQW
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]