| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477909
Identifier: 113477909
GI number: 113477909
Start: 6964049
End: 6964318
Strand: Reverse
Name: 113477909
Synonym: Tery_4512
Alternate gene names: NA
Gene position: 6964318-6964049 (Counterclockwise)
Preceding gene: 113477910
Following gene: 113477906
Centisome position: 89.86
GC content: 37.41
Gene sequence:
>270_bases ATGGCTTTCTACAAAGGAAATCAGCTACTTGCATATTGGAAAGCTACAGATTTTGCTGGTTATGGTGAAAGTCGATACGT TAATTTCTTTGCTGAGGAAAATGAGTCTTTTGACCGAATAATTCTATCTTCTTCTAATCCTGCTTTGGAAACAGAGAATC ATGCTTACAGACTTGTTTCTGAGCCTAATACCTCAGTTCCCGAAGCAACTTCTGCAATAGGTTTATTGATATTTGGTGCT GTTGCTTATCGTTTGAGGAAAGCCAAATAA
Upstream 100 bases:
>100_bases TTTGGTAATGCTTTAGGAAATAATCCAGTTACAATTAGCTCTCAGGAACAACTAGATTATTTTGGTATGTACTGGGGGTC TAGCAGACTATGATAATAGG
Downstream 100 bases:
>100_bases ATCATCAGGACTTACCCAGGTAAACTACTAAAGGCTGGTATATTGGGGTGTTGGGTAACTTTGATTTTGGTTCCTATTTT CATCCTCTAACCACTAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MAFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVSEPNTSVPEATSAIGLLIFGA VAYRLRKAK
Sequences:
>Translated_89_residues MAFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVSEPNTSVPEATSAIGLLIFGA VAYRLRKAK >Mature_88_residues AFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVSEPNTSVPEATSAIGLLIFGAV AYRLRKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9989; Mature: 9858
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVS CCEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEC EPNTSVPEATSAIGLLIFGAVAYRLRKAK CCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVS CEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEC EPNTSVPEATSAIGLLIFGAVAYRLRKAK CCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA