Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477902

Identifier: 113477902

GI number: 113477902

Start: 6950596

End: 6950904

Strand: Reverse

Name: 113477902

Synonym: Tery_4504

Alternate gene names: NA

Gene position: 6950904-6950596 (Counterclockwise)

Preceding gene: 113477903

Following gene: 113477900

Centisome position: 89.69

GC content: 39.81

Gene sequence:

>309_bases
ATGATGGCCAACATTAAGTTTGAAAACGAAAATCAGGAAGTAATTGCTGCTGATGGAGCCAATTTAAGGCTCAAAGCTCT
AGAAAATCGCGTTGACATTTACACCTTTACGGCCAAATTGATGAATTGTGGTGGCTATGGACAGTGTGGCACTTGTGTTG
TAGAAATTATTGAAGGTCTGGAAAATCTTTCACCCCGTACTGAGGTGGAAGAAAAAAAGTTAAAAAAGAGGCCTGAAAAC
TGGAGATTAGCTTGTCAGGTCCTAGTGAACGGTCCTGTGGTTGTCAAAACAAAACCAAAACGTAAATAA

Upstream 100 bases:

>100_bases
AAAAAGTTGCCTGATGCGGGTGGGAGACTTTAAACTTAAAAATTAAGTTAAAGTTCTTAATATTAGTTAATATTTTTTTA
TAACAATAAATTAATAATTC

Downstream 100 bases:

>100_bases
TGGTATTCTGGATTTATGGTATTTAAATTCTTCGGTGGGTAATTATGGAAGTTAATGATTTGGGTTTTGTGGCAACCATT
TTGTTTATATTTGTGCCAGC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin 2Fe-2S Type; Hydrogenase Component

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMANIKFENENQEVIAADGANLRLKALENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGLENLSPRTEVEEKKLKKRPEN
WRLACQVLVNGPVVVKTKPKRK

Sequences:

>Translated_102_residues
MMANIKFENENQEVIAADGANLRLKALENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGLENLSPRTEVEEKKLKKRPEN
WRLACQVLVNGPVVVKTKPKRK
>Mature_102_residues
MMANIKFENENQEVIAADGANLRLKALENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGLENLSPRTEVEEKKLKKRPEN
WRLACQVLVNGPVVVKTKPKRK

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11494; Mature: 11494

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMANIKFENENQEVIAADGANLRLKALENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGL
CCCCEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHH
ENLSPRTEVEEKKLKKRPENWRLACQVLVNGPVVVKTKPKRK
HCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCC
>Mature Secondary Structure
MMANIKFENENQEVIAADGANLRLKALENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGL
CCCCEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHH
ENLSPRTEVEEKKLKKRPENWRLACQVLVNGPVVVKTKPKRK
HCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA