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The map label for this gene is yejH [C]

Identifier: 113477812

GI number: 113477812

Start: 6797474

End: 6799246

Strand: Reverse

Name: yejH [C]

Synonym: Tery_4412

Alternate gene names: 113477812

Gene position: 6799246-6797474 (Counterclockwise)

Preceding gene: 113477815

Following gene: 113477810

Centisome position: 87.73

GC content: 39.48

Gene sequence:

>1773_bases
ATGTATCGTAAACCAACTATCTCATTCGATCGCGGGACTCTTATCCTCCATCCCCCACCCCAGGGAAAAACTTGGATAGA
CTACGCTACCTGGGATGACCGGGTAGAAAAATTCCGGGTTAGGGCAATAGACTATCGGCCTTTAGTAGAATTGTTAAAAG
CAGAAAAAATCGACTTTATTGACAAAGCTAAAGAGTTTGCACCTCTTGAGCTCATTCCTAGTTTCGAGATGCTACCCTAC
CCCCATCAGGAAGCTGCATTAAAAGCTTGGAAACAAAATAATAGAAATGGAGTTGTTATCCTCCCCACTGCTTCGGGTAA
AACATATTTGGCACAACTAGCAATGCAGGCAACTCCCCGCAGTACCCTTGTAGTAGTGCCTACCCTAGATTTAATGCACC
AATGGTATGCACATTTAAACGCAGCGTTTCCCGATGTAGAGGTAGGGTTGCTCGGAGGTGGTTCTAGGGATAAAACACCA
ATTTTAGTAGCAACTTACGATAGTGCAACTATTCATGCCGAGACGATCGGAAATAAATATGCTCTATTAGTTTTCGATGA
ATGCCACCACTTGCCCACTGATTTTTATCGGGTGATAGCCGAATACGCGATCTCTCCTTATCGCCTCGGTCTTACCGCTA
CCCCTAACCGTTCCGATGGTCGTCATTCTGACCTAAATTATTTAATTGGACCTACCGTTTTTAGCAAAACTCCTGAAGAG
TTAGCAGGTAGCGCCTTAGCTGACCATAAAATCGTGCAAATAATGGTTAAACTATCGCCACAAGAGCGTGAAGAATATAA
CAAGTTAATGATAATTAGAAATGACTTTTTAACACAGGCAAATATTAAATTAGGTGGGGTAAATGGTTGGAAAAACTTTG
TTATAGCGAGTGCTCGTTCTACTGCTGGTCGTCGAGCAATGCTAGCTCACCGTCAAGCTAAAGAAATTGCTCTTGGTACT
GAGGGAAAATTGCGAACTTTAAGTAATTTACTGGTTCAACATTTCCCAGAACGTACCTTAATTTTTACAGCTGATAATAC
TACAGTTTATCGAATTTCCCATGACTTTTTAATCCCGGCAATTACTCATCAAACACCTGTAAAAGAACGCCATGAAGTTT
TAAGTAAATTTCGGACTGGGGAATATAAAACTATTGTAGCTTCTCATGTTTTAAATGAAGGTGTTGATGTTCCAGATGCG
AGGGTAGCAGTTATTTTGTCTGGTACAGGTAGCGAACGAGAATATATTCAAAGGTTAGGTCGAGTTTTGCGTCGAGGTAG
TGATAAAAATAAGTTAGCAATTTTGTATGAAGTTGTTACAGAAAATACTACTGAAGAGCAGACTTCTCGCAGACGTAGAG
CTGGAATTAAGAGGAAAAAGTCTCATCAAGATCAAGATGAAAAACAGGAAAATTCCGTTGTTCAGCAGTTAGAAATTATT
AAACCAGAACCTAATTATGAAATTAATAATCCAGCCGCTCAAGCTGTAGCTGAACCTGGAGTAAAATGGGATTATGAGAA
AGAAAATGATGTAAAAACTCCAGAGGATAACTTGCCCAACCAAAAATTTGCTAAATCTCAAGAGCAAGACCAGGAAAAAA
CAGAACTTCAACCATTAGAAAATATTCAGCCAGAACCGATTTATAGAATTAATAATTCTACTACTAAACTGGCTGCAGAA
CCAGGTAAAAAGTATAAAGAATATGGGAAAGACAACCCTGAGGAAGAATCTGTTAAATCTCAAGAGCAAGAACAGGAAAA
AACAGAACTTTAA

Upstream 100 bases:

>100_bases
TTCAAACTTTAGATGTCCAATAATTTCCTAAAATTACTATAGCGTTAAAGTTCATGACTTTTAACTTTTCACTCCTGACT
TTTAACTTGAAAACCCTATA

Downstream 100 bases:

>100_bases
CTATTAGAAAATATTCAGCCAGAACCGATTTATATAATTAATAATTCTACTACTAAACTGGCTGCATAATCAGGTGTAAA
ATATCGAAAATATGAGAAAG

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; Helicase Domain-Containing Protein; Helicase Domain Protein; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; Type III Restriction Res Subunit Family; DNA Repair Helicase Rad; Superfamily II DNA/RNA Helicase; Helicase; DNA Helicase; DNA Repair Protein; DNA Repair Protein RAD; DNA/RNA Helicase; DNA Repair Protein Rad; DNA/RNA Helicase Superfamily II; Helicase-Like Protein; Helicase Protein; ATP-Dependent Helicase; DNA/RNA Repair Helicase; Helicase DNA Repair; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; DEAD/DEAH Box Helicase-Like; DNA-Helicase; DNA Or RNA Helicase Of Superfamily II; DNA Or RNA Helicase Of Superfamily Protein II; DEAD/DEAH Box Helicase; Helicase ATP-Dependent; DNA Or RNA Helicase; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction; Restriction Endonuclease Family Protein; Helicase ATP-Dependent Intein-Containing; DNA-Repair Protein; RNA Polymerase Sigma

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MYRKPTISFDRGTLILHPPPQGKTWIDYATWDDRVEKFRVRAIDYRPLVELLKAEKIDFIDKAKEFAPLELIPSFEMLPY
PHQEAALKAWKQNNRNGVVILPTASGKTYLAQLAMQATPRSTLVVVPTLDLMHQWYAHLNAAFPDVEVGLLGGGSRDKTP
ILVATYDSATIHAETIGNKYALLVFDECHHLPTDFYRVIAEYAISPYRLGLTATPNRSDGRHSDLNYLIGPTVFSKTPEE
LAGSALADHKIVQIMVKLSPQEREEYNKLMIIRNDFLTQANIKLGGVNGWKNFVIASARSTAGRRAMLAHRQAKEIALGT
EGKLRTLSNLLVQHFPERTLIFTADNTTVYRISHDFLIPAITHQTPVKERHEVLSKFRTGEYKTIVASHVLNEGVDVPDA
RVAVILSGTGSEREYIQRLGRVLRRGSDKNKLAILYEVVTENTTEEQTSRRRRAGIKRKKSHQDQDEKQENSVVQQLEII
KPEPNYEINNPAAQAVAEPGVKWDYEKENDVKTPEDNLPNQKFAKSQEQDQEKTELQPLENIQPEPIYRINNSTTKLAAE
PGKKYKEYGKDNPEEESVKSQEQEQEKTEL

Sequences:

>Translated_590_residues
MYRKPTISFDRGTLILHPPPQGKTWIDYATWDDRVEKFRVRAIDYRPLVELLKAEKIDFIDKAKEFAPLELIPSFEMLPY
PHQEAALKAWKQNNRNGVVILPTASGKTYLAQLAMQATPRSTLVVVPTLDLMHQWYAHLNAAFPDVEVGLLGGGSRDKTP
ILVATYDSATIHAETIGNKYALLVFDECHHLPTDFYRVIAEYAISPYRLGLTATPNRSDGRHSDLNYLIGPTVFSKTPEE
LAGSALADHKIVQIMVKLSPQEREEYNKLMIIRNDFLTQANIKLGGVNGWKNFVIASARSTAGRRAMLAHRQAKEIALGT
EGKLRTLSNLLVQHFPERTLIFTADNTTVYRISHDFLIPAITHQTPVKERHEVLSKFRTGEYKTIVASHVLNEGVDVPDA
RVAVILSGTGSEREYIQRLGRVLRRGSDKNKLAILYEVVTENTTEEQTSRRRRAGIKRKKSHQDQDEKQENSVVQQLEII
KPEPNYEINNPAAQAVAEPGVKWDYEKENDVKTPEDNLPNQKFAKSQEQDQEKTELQPLENIQPEPIYRINNSTTKLAAE
PGKKYKEYGKDNPEEESVKSQEQEQEKTEL
>Mature_590_residues
MYRKPTISFDRGTLILHPPPQGKTWIDYATWDDRVEKFRVRAIDYRPLVELLKAEKIDFIDKAKEFAPLELIPSFEMLPY
PHQEAALKAWKQNNRNGVVILPTASGKTYLAQLAMQATPRSTLVVVPTLDLMHQWYAHLNAAFPDVEVGLLGGGSRDKTP
ILVATYDSATIHAETIGNKYALLVFDECHHLPTDFYRVIAEYAISPYRLGLTATPNRSDGRHSDLNYLIGPTVFSKTPEE
LAGSALADHKIVQIMVKLSPQEREEYNKLMIIRNDFLTQANIKLGGVNGWKNFVIASARSTAGRRAMLAHRQAKEIALGT
EGKLRTLSNLLVQHFPERTLIFTADNTTVYRISHDFLIPAITHQTPVKERHEVLSKFRTGEYKTIVASHVLNEGVDVPDA
RVAVILSGTGSEREYIQRLGRVLRRGSDKNKLAILYEVVTENTTEEQTSRRRRAGIKRKKSHQDQDEKQENSVVQQLEII
KPEPNYEINNPAAQAVAEPGVKWDYEKENDVKTPEDNLPNQKFAKSQEQDQEKTELQPLENIQPEPIYRINNSTTKLAAE
PGKKYKEYGKDNPEEESVKSQEQEQEKTEL

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=418, Percent_Identity=25.8373205741627, Blast_Score=100, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17556358, Length=416, Percent_Identity=24.7596153846154, Blast_Score=108, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6322048, Length=450, Percent_Identity=25.5555555555556, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI221331068, Length=404, Percent_Identity=26.2376237623762, Blast_Score=106, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24662247, Length=404, Percent_Identity=26.2376237623762, Blast_Score=106, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67009; Mature: 67009

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKPTISFDRGTLILHPPPQGKTWIDYATWDDRVEKFRVRAIDYRPLVELLKAEKIDFI
CCCCCCCEECCCEEEECCCCCCCEEEEECCHHHHHHHHHHEEECHHHHHHHHHHHCCHHH
DKAKEFAPLELIPSFEMLPYPHQEAALKAWKQNNRNGVVILPTASGKTYLAQLAMQATPR
HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC
STLVVVPTLDLMHQWYAHLNAAFPDVEVGLLGGGSRDKTPILVATYDSATIHAETIGNKY
CEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEE
ALLVFDECHHLPTDFYRVIAEYAISPYRLGLTATPNRSDGRHSDLNYLIGPTVFSKTPEE
EEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCHHHCCCHHH
LAGSALADHKIVQIMVKLSPQEREEYNKLMIIRNDFLTQANIKLGGVNGWKNFVIASARS
HHCCHHHHHHEEEHEECCCCHHHHCCCEEEEEECCCEEECCEEEECCCCCCCEEEEECCC
TAGRRAMLAHRQAKEIALGTEGKLRTLSNLLVQHFPERTLIFTADNTTVYRISHDFLIPA
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEE
ITHQTPVKERHEVLSKFRTGEYKTIVASHVLNEGVDVPDARVAVILSGTGSEREYIQRLG
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHH
RVLRRGSDKNKLAILYEVVTENTTEEQTSRRRRAGIKRKKSHQDQDEKQENSVVQQLEII
HHHHCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHC
KPEPNYEINNPAAQAVAEPGVKWDYEKENDVKTPEDNLPNQKFAKSQEQDQEKTELQPLE
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
NIQPEPIYRINNSTTKLAAEPGKKYKEYGKDNPEEESVKSQEQEQEKTEL
CCCCCCEEEECCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRKPTISFDRGTLILHPPPQGKTWIDYATWDDRVEKFRVRAIDYRPLVELLKAEKIDFI
CCCCCCCEECCCEEEECCCCCCCEEEEECCHHHHHHHHHHEEECHHHHHHHHHHHCCHHH
DKAKEFAPLELIPSFEMLPYPHQEAALKAWKQNNRNGVVILPTASGKTYLAQLAMQATPR
HHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC
STLVVVPTLDLMHQWYAHLNAAFPDVEVGLLGGGSRDKTPILVATYDSATIHAETIGNKY
CEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEE
ALLVFDECHHLPTDFYRVIAEYAISPYRLGLTATPNRSDGRHSDLNYLIGPTVFSKTPEE
EEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCHHHCCCHHH
LAGSALADHKIVQIMVKLSPQEREEYNKLMIIRNDFLTQANIKLGGVNGWKNFVIASARS
HHCCHHHHHHEEEHEECCCCHHHHCCCEEEEEECCCEEECCEEEECCCCCCCEEEEECCC
TAGRRAMLAHRQAKEIALGTEGKLRTLSNLLVQHFPERTLIFTADNTTVYRISHDFLIPA
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEE
ITHQTPVKERHEVLSKFRTGEYKTIVASHVLNEGVDVPDARVAVILSGTGSEREYIQRLG
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHH
RVLRRGSDKNKLAILYEVVTENTTEEQTSRRRRAGIKRKKSHQDQDEKQENSVVQQLEII
HHHHCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHC
KPEPNYEINNPAAQAVAEPGVKWDYEKENDVKTPEDNLPNQKFAKSQEQDQEKTELQPLE
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
NIQPEPIYRINNSTTKLAAEPGKKYKEYGKDNPEEESVKSQEQEQEKTEL
CCCCCCEEEECCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA