Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yqeG [H]

Identifier: 113477778

GI number: 113477778

Start: 6743091

End: 6743648

Strand: Reverse

Name: yqeG [H]

Synonym: Tery_4375

Alternate gene names: 113477778

Gene position: 6743648-6743091 (Counterclockwise)

Preceding gene: 113477779

Following gene: 113477776

Centisome position: 87.01

GC content: 32.8

Gene sequence:

>558_bases
ATGTGTTGGGGTAAACTTTTACAACCAGATTTAGTTCTGGGTAACTCAGTCTTAAGTCTAACATTAGAAATTCTCCAAAA
ATATCAAATTCAAGGTTTGGTGTTAGATGTAGATGAGACTATTGTGCCAATTCACCATAGTCAAGCTTCTCCTGAATTAG
CTGTGTGGGTAGAAAAAATTAAAAGTGTAGCAAGTTTATGGTTAGTCAGTAATAATCTTAGTCAAGATAGAATAGGTCGA
ATTGGTGATTTACTCAATATACCTTATATTACTGCTGCTGGGAAACCTTCTCGTCGTAAGTTAAAAAAGGCTGTTGATGC
GATGAATTTACCAGTAGAAAAAGTTGCTATGGTAGGCGATCGCTTGTTTACTGATGTTTTAGCAGGAAATCGTTTAGGAA
TGTTTACTATTCTTGTTGAACCTATATCTAGTAATGGTTTAGAATTTTCTAACTATAAAGTTCGTTCTTTTGAAGTATGG
GTTTCTCAAATATTAGGAGTATCTTTGAATTTGACTACTCACTCTTTGATTTATGATCATAAAAATGATTTTATGTAA

Upstream 100 bases:

>100_bases
ATTAGCGACTTGTTAATAAATATTTTTTTCTATTTATACTCTGCTAATTTTTTACTTTATAATTGAGCAGCTGAAAATTA
TTGTTATAAATATTAATATT

Downstream 100 bases:

>100_bases
CTATTCAGCTCTCAGCTATCAGCTTCATTACCTTTAGAGGTTTCAAAGAATTAAAAGTAATATAGTAGAAATGAAACCAA
TGCTTACTTAATTCATTGGT

Product: HAD family phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKIKSVASLWLVSNNLSQDRIGR
IGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGDRLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVW
VSQILGVSLNLTTHSLIYDHKNDFM

Sequences:

>Translated_185_residues
MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKIKSVASLWLVSNNLSQDRIGR
IGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGDRLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVW
VSQILGVSLNLTTHSLIYDHKNDFM
>Mature_185_residues
MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKIKSVASLWLVSNNLSQDRIGR
IGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGDRLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVW
VSQILGVSLNLTTHSLIYDHKNDFM

Specific function: Unknown

COG id: COG2179

COG function: function code R; Predicted hydrolase of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006549
- InterPro:   IPR010021 [H]

Pfam domain/function: PF09419 DUF2010 [H]

EC number: NA

Molecular weight: Translated: 20642; Mature: 20642

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKI
CCCCHHCCCCHHHCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHHHHHH
KSVASLWLVSNNLSQDRIGRIGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGD
HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
RLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVWVSQILGVSLNLTTHSLIYDH
HHHHHHHCCCCCEEEEEEEEECCCCCEECCCEEEHHHHHHHHHHHCCEEECEEHEEEECC
KNDFM
CCCCC
>Mature Secondary Structure
MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKI
CCCCHHCCCCHHHCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHHHHHH
KSVASLWLVSNNLSQDRIGRIGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGD
HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
RLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVWVSQILGVSLNLTTHSLIYDH
HHHHHHHCCCCCEEEEEEEEECCCCCEECCCEEEHHHHHHHHHHHCCEEECEEHEEEECC
KNDFM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]