Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477757

Identifier: 113477757

GI number: 113477757

Start: 6712499

End: 6712870

Strand: Reverse

Name: 113477757

Synonym: Tery_4353

Alternate gene names: NA

Gene position: 6712870-6712499 (Counterclockwise)

Preceding gene: 113477758

Following gene: 113477756

Centisome position: 86.62

GC content: 38.44

Gene sequence:

>372_bases
ATGGAATCATCTCTAAATTTTTTAACTTCCGAGGAGTCGGCTCAAGTTGATGCAGCTCTCTTAACTTCAAAAGATAAGTT
TTCAACGCGTTTGGCCATTTATTCTTTAAGGTGTTTAAGGCAAATAGCAAGGGAAACAGGTTTGACTCTAGAGGAAATAC
CTGCTGAACAGGTGAAGGCTTGGATGCAAAAGGACAAAAGTCTGAAGCAAAATTTAGATTCAGACCCTAGTTTTGAGAGC
TTCTTTACTAGATTGGTGATGGCCTCCTTGTCCCCTTTAAAACAAGTTGCTCAAGAATCTGCTGTAGCACTTCAGGATTT
AACTGTCCAACAAGTTGTTAAATGGTTTGAGAAAAAAGGGAAAATTCAGTAA

Upstream 100 bases:

>100_bases
GTACTGAGAATTTAACCTCCTCTTTTTGACCTTTGACTTTTAACTTTTGTTAGAATGCCCCTTTCCCGTCAGTCAAAAAA
TATCAAATCATAAAGTTAAT

Downstream 100 bases:

>100_bases
AGAAGAAAGGTTAGAGCTTAATTTGGGCCACAAATATACAGATGGCCCCTAGATGACAGTTTTTGGGTGCCTGATTTTAG
GAAAAATGGCCGATTTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MESSLNFLTSEESAQVDAALLTSKDKFSTRLAIYSLRCLRQIARETGLTLEEIPAEQVKAWMQKDKSLKQNLDSDPSFES
FFTRLVMASLSPLKQVAQESAVALQDLTVQQVVKWFEKKGKIQ

Sequences:

>Translated_123_residues
MESSLNFLTSEESAQVDAALLTSKDKFSTRLAIYSLRCLRQIARETGLTLEEIPAEQVKAWMQKDKSLKQNLDSDPSFES
FFTRLVMASLSPLKQVAQESAVALQDLTVQQVVKWFEKKGKIQ
>Mature_123_residues
MESSLNFLTSEESAQVDAALLTSKDKFSTRLAIYSLRCLRQIARETGLTLEEIPAEQVKAWMQKDKSLKQNLDSDPSFES
FFTRLVMASLSPLKQVAQESAVALQDLTVQQVVKWFEKKGKIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13914; Mature: 13914

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSLNFLTSEESAQVDAALLTSKDKFSTRLAIYSLRCLRQIARETGLTLEEIPAEQVKA
CCCCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHH
WMQKDKSLKQNLDSDPSFESFFTRLVMASLSPLKQVAQESAVALQDLTVQQVVKWFEKKG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIQ
CCC
>Mature Secondary Structure
MESSLNFLTSEESAQVDAALLTSKDKFSTRLAIYSLRCLRQIARETGLTLEEIPAEQVKA
CCCCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHH
WMQKDKSLKQNLDSDPSFESFFTRLVMASLSPLKQVAQESAVALQDLTVQQVVKWFEKKG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA