Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477730

Identifier: 113477730

GI number: 113477730

Start: 6668444

End: 6668674

Strand: Reverse

Name: 113477730

Synonym: Tery_4325

Alternate gene names: NA

Gene position: 6668674-6668444 (Counterclockwise)

Preceding gene: 113477736

Following gene: 113477729

Centisome position: 86.05

GC content: 33.33

Gene sequence:

>231_bases
ATGAGAGTTAATATATTTAACACAGGAGAAAAAGCTCATGGGACTGACGTTCAGCTAGCCATATCCCAAGGATATTTTCA
ACAGTCGAATATTGACTCAGATATTTGTCAAGAGTCCCTAGATATTTGTGTCCAATTTCTCAGACTAGGTAAAATTCAGA
GACATATTTTTATTGGTGCTTACCAAACTAAACCAAAATTTTGCTTAAAAAAAGTTGTTTTAGAAGCATGA

Upstream 100 bases:

>100_bases
TGATCTTCTAGAAATGTAAGTCATTTGACATTCTCCATTAGACATTTAACTCACTAGGGACTATTGTAGTAGAACCAGAT
TCAAAGCGTCTTGAAAGTTG

Downstream 100 bases:

>100_bases
AATTATCTCAAAAAACTTGTGAAAAAATTAAACCTTAATGACCCTGGCCTTAACAGCTAAGGTTATATATTTCACGCTAA
AGCTAACTGTTTACGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRVNIFNTGEKAHGTDVQLAISQGYFQQSNIDSDICQESLDICVQFLRLGKIQRHIFIGAYQTKPKFCLKKVVLEA

Sequences:

>Translated_76_residues
MRVNIFNTGEKAHGTDVQLAISQGYFQQSNIDSDICQESLDICVQFLRLGKIQRHIFIGAYQTKPKFCLKKVVLEA
>Mature_76_residues
MRVNIFNTGEKAHGTDVQLAISQGYFQQSNIDSDICQESLDICVQFLRLGKIQRHIFIGAYQTKPKFCLKKVVLEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8646; Mature: 8646

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNIFNTGEKAHGTDVQLAISQGYFQQSNIDSDICQESLDICVQFLRLGKIQRHIFIGA
CEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE
YQTKPKFCLKKVVLEA
CCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRVNIFNTGEKAHGTDVQLAISQGYFQQSNIDSDICQESLDICVQFLRLGKIQRHIFIGA
CEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE
YQTKPKFCLKKVVLEA
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA