| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476945
Identifier: 113476945
GI number: 113476945
Start: 5260646
End: 5260837
Strand: Reverse
Name: 113476945
Synonym: Tery_3440
Alternate gene names: NA
Gene position: 5260837-5260646 (Counterclockwise)
Preceding gene: 113476946
Following gene: 113476942
Centisome position: 67.88
GC content: 34.38
Gene sequence:
>192_bases ATGTGCGGAGATGCGATTCATATTCCTCTAAATGCTGGTTTTGCTAGTAGTACAGATATGATTTTGATACCCGAAATTCC TGATAAAATAGATAATATTTGTAACTATATTAGCAAACGTTCTAATTTAGACAAAAACTACTCTTTGATAGTTTTAGCAG AGGCCGTGAGGACGGAAAGTGATACAAGATGA
Upstream 100 bases:
>100_bases GAAAGTAGGTTTTTGTCATTTCAAATGACGACATTTGATAATCTAATATGAAATCCAATTAATTCGGTGAAAAAAATGTT TCATTCTAATTTTAGAAGTA
Downstream 100 bases:
>100_bases TTTATTTGTTAAGTCTCATTTTGGCAGTACTGAACATTATCTAGCAGATAAAGTCTATGTTTGTCCTGGTGCGGAAACTC GTTTTACATTGTTAGATAAT
Product: phosphofructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MCGDAIHIPLNAGFASSTDMILIPEIPDKIDNICNYISKRSNLDKNYSLIVLAEAVRTESDTR
Sequences:
>Translated_63_residues MCGDAIHIPLNAGFASSTDMILIPEIPDKIDNICNYISKRSNLDKNYSLIVLAEAVRTESDTR >Mature_63_residues MCGDAIHIPLNAGFASSTDMILIPEIPDKIDNICNYISKRSNLDKNYSLIVLAEAVRTESDTR
Specific function: Unknown
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6968; Mature: 6968
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGDAIHIPLNAGFASSTDMILIPEIPDKIDNICNYISKRSNLDKNYSLIVLAEAVRTES CCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC DTR CCC >Mature Secondary Structure MCGDAIHIPLNAGFASSTDMILIPEIPDKIDNICNYISKRSNLDKNYSLIVLAEAVRTES CCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC DTR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA