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The map label for this gene is 113476874

Identifier: 113476874

GI number: 113476874

Start: 5158360

End: 5158881

Strand: Reverse

Name: 113476874

Synonym: Tery_3360

Alternate gene names: NA

Gene position: 5158881-5158360 (Counterclockwise)

Preceding gene: 113476876

Following gene: 113476872

Centisome position: 66.57

GC content: 39.46

Gene sequence:

>522_bases
ATGACTCAAGCTAAAATTCCTTTGCCAGAGTCTGTGAGTCTAGAAGCTCTGGTCTCTGATATTACCCACTTTGAACAGAC
GATCGCTCATTGGGATGAAAATCAAAAGTTAGTAGTTGAGGGATTGAAAAATGCTATTGAAGCATTACACAAAGAAGCTT
TGACTAGATTAATTCGTAGTGTGAAAAAAGAATCTATGCCAGCACTGCGTGAAGCGGTGCAAGATGAGGTAGTTTATGGT
TTATTGCGTTACCACGAATTAGTTAAACCACCCACACCACCTTTAGAAATTAGGATTCAACAAGCATTGGATGAAGTTCG
CCCAGGTTTGCAAAGCCATAATGGTGATGTGGAGTTAGTTGGGATAAAATTGCCCGATACCGTAGAGGTCAAGTTAGTGG
GAAATTGTAGTAACTGTCCTGCTTCCACATTAACCATGAAAGACGGTGTGGAACAAGCTATTAAAACCCATTGCCCAGAA
ATTAAAAATGTAGTTTCTGTACATATTTCTGGCATTAGTTAA

Upstream 100 bases:

>100_bases
GAAAGTTTTTTGAGAAGCGATGCTCCGGACATAATATAATTGATAACTAATAATTAATAACTGATAATTGATAACCGATA
ACTAATAACTAATAACTGAT

Downstream 100 bases:

>100_bases
TTTGGCTATGATTTTTGTGTTTAGGGAGTAGATACAGCTCTGGTTTTATCCATAGTTGCTACTAAAACCCCAAGGTGAGG
GGAACCCGCGCTGTTTCAGA

Product: nitrogen-fixing NifU-like protein

Products: NA

Alternate protein names: Nitrogen-Fixing NifU Domain-Containing Protein; Rieske Domain Protein; Nitrogen-Fixing NifU-Like; Rieske Domain-Containing Protein; NifU-Like Protein; NifU Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Nitrogen-Fixing Nifu Domain Protein; Rieske Iron-Sulfur Domain-Containing Protein; Thioredoxin Domain-Containing Protein; Nitrogen-Fixing NifU Rieske Region; Fe-S Cluster Assembly Protein Nifu-Like; NifU-Like Domain Protein; Nitrogen-Fixing NifU C-Terminal; Thioredoxin-Like Protein; Thioredoxin/NifU-Like Domain-Containing Protein; NifU-Like Domain-Containing Protein

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTQAKIPLPESVSLEALVSDITHFEQTIAHWDENQKLVVEGLKNAIEALHKEALTRLIRSVKKESMPALREAVQDEVVYG
LLRYHELVKPPTPPLEIRIQQALDEVRPGLQSHNGDVELVGIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKTHCPE
IKNVVSVHISGIS

Sequences:

>Translated_173_residues
MTQAKIPLPESVSLEALVSDITHFEQTIAHWDENQKLVVEGLKNAIEALHKEALTRLIRSVKKESMPALREAVQDEVVYG
LLRYHELVKPPTPPLEIRIQQALDEVRPGLQSHNGDVELVGIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKTHCPE
IKNVVSVHISGIS
>Mature_172_residues
TQAKIPLPESVSLEALVSDITHFEQTIAHWDENQKLVVEGLKNAIEALHKEALTRLIRSVKKESMPALREAVQDEVVYGL
LRYHELVKPPTPPLEIRIQQALDEVRPGLQSHNGDVELVGIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKTHCPEI
KNVVSVHISGIS

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19092; Mature: 18961

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAKIPLPESVSLEALVSDITHFEQTIAHWDENQKLVVEGLKNAIEALHKEALTRLIRS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKKESMPALREAVQDEVVYGLLRYHELVKPPTPPLEIRIQQALDEVRPGLQSHNGDVELV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCEEEE
GIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKTHCPEIKNVVSVHISGIS
EEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQAKIPLPESVSLEALVSDITHFEQTIAHWDENQKLVVEGLKNAIEALHKEALTRLIRS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKKESMPALREAVQDEVVYGLLRYHELVKPPTPPLEIRIQQALDEVRPGLQSHNGDVELV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCEEEE
GIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKTHCPEIKNVVSVHISGIS
EEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA