| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mntC [H]
Identifier: 113476872
GI number: 113476872
Start: 5152432
End: 5153325
Strand: Reverse
Name: mntC [H]
Synonym: Tery_3358
Alternate gene names: 113476872
Gene position: 5153325-5152432 (Counterclockwise)
Preceding gene: 113476874
Following gene: 113476869
Centisome position: 66.49
GC content: 34.34
Gene sequence:
>894_bases ATGTTAGAAAAATTAGTTGAACCATTACAATATAGTTTTATGCAGCGATCGCTCCTAGTAGCAATAATAGTTGGAATTAT TTGTGCAGTAGTAGGCAGTTATTTAATGGTACAAAGATTAGCTCTACTAGGAGATGCAATTAGTCACTCAGTACTACCAG GATTAGCCATTGCTTTTTGGGTTGGAGCAAATATATTTATCGGGGCATTTATAGCCGGCATAATTAGCACAATTTTAATC AATCTAATTAGAACGCGATCGTCAATCAAAGAAGACGCAGCAATGGGCATAGTTTTTTCAGCCTTCTTTGCTTTAGGAAT AACACTAATGACAATTATTCAGAAAGACAATAAAATCGACCTCAATCATTTTTTATTCGGTAATATTCTAGGCGTAACCG TTGGAGACGTCCGCGATACACTAATTATTGGTATAATTGTTTTATTAGTTGTAATCTTACTTTATAAAGAACTATTATTT TATACATTTGATCCCCTCGGCGCTCAAGCAGTAGGTTTACCTGTAAACTTATTAAACCTAGGGCTAATGATGTTAATTGG TTTAACAATTGTAGCAAGTCTTAAAGCAGTAGGAGTAGTATTAGTTTTATCCTTATTAATCACACCAGCATCTACAGCTT ATCTATTAGTCAAAAGACTTCACCAAGTAATCATATTAGGAGTAGGAATAGGAACTTTATCTAGTATTAGTGGGATGTAT ATTAGCTATTTCTATAACTTGCCATCTGGTCCAGCAATTGTATTAGTATCATTTGGGTTATTTATACTAGCTTTTTTGTT CAGCCCCACTCAGGGAATTTTCACTCATCCCCCATCAATTTCTAGTCAGCCCTCTATCTGGCGGGAGTTAAAAAGTTTAA TTAAGTCAAATTAA
Upstream 100 bases:
>100_bases TATTGAATTAATCATCTAAAATATTCTGAAATTAAAAATTATTTTTTTTTGCGATAAAATCAAAATAATCAAAAACACAA AAAAGAGGAAACAAGCACCA
Downstream 100 bases:
>100_bases GCAGATCAGATCAAATTCTCTTCAACACTTAGGTTTAGCACATCTATTGTCTAATAAGGTGAGAATTATTGCAGGTCAGC AGGTCAGTAAGTCAGCATGG
Product: hypothetical protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLEKLVEPLQYSFMQRSLLVAIIVGIICAVVGSYLMVQRLALLGDAISHSVLPGLAIAFWVGANIFIGAFIAGIISTILI NLIRTRSSIKEDAAMGIVFSAFFALGITLMTIIQKDNKIDLNHFLFGNILGVTVGDVRDTLIIGIIVLLVVILLYKELLF YTFDPLGAQAVGLPVNLLNLGLMMLIGLTIVASLKAVGVVLVLSLLITPASTAYLLVKRLHQVIILGVGIGTLSSISGMY ISYFYNLPSGPAIVLVSFGLFILAFLFSPTQGIFTHPPSISSQPSIWRELKSLIKSN
Sequences:
>Translated_297_residues MLEKLVEPLQYSFMQRSLLVAIIVGIICAVVGSYLMVQRLALLGDAISHSVLPGLAIAFWVGANIFIGAFIAGIISTILI NLIRTRSSIKEDAAMGIVFSAFFALGITLMTIIQKDNKIDLNHFLFGNILGVTVGDVRDTLIIGIIVLLVVILLYKELLF YTFDPLGAQAVGLPVNLLNLGLMMLIGLTIVASLKAVGVVLVLSLLITPASTAYLLVKRLHQVIILGVGIGTLSSISGMY ISYFYNLPSGPAIVLVSFGLFILAFLFSPTQGIFTHPPSISSQPSIWRELKSLIKSN >Mature_297_residues MLEKLVEPLQYSFMQRSLLVAIIVGIICAVVGSYLMVQRLALLGDAISHSVLPGLAIAFWVGANIFIGAFIAGIISTILI NLIRTRSSIKEDAAMGIVFSAFFALGITLMTIIQKDNKIDLNHFLFGNILGVTVGDVRDTLIIGIIVLLVVILLYKELLF YTFDPLGAQAVGLPVNLLNLGLMMLIGLTIVASLKAVGVVLVLSLLITPASTAYLLVKRLHQVIILGVGIGTLSSISGMY ISYFYNLPSGPAIVLVSFGLFILAFLFSPTQGIFTHPPSISSQPSIWRELKSLIKSN
Specific function: This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=245, Percent_Identity=29.7959183673469, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 31989; Mature: 31989
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLVEPLQYSFMQRSLLVAIIVGIICAVVGSYLMVQRLALLGDAISHSVLPGLAIAFW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGANIFIGAFIAGIISTILINLIRTRSSIKEDAAMGIVFSAFFALGITLMTIIQKDNKID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LNHFLFGNILGVTVGDVRDTLIIGIIVLLVVILLYKELLFYTFDPLGAQAVGLPVNLLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHH GLMMLIGLTIVASLKAVGVVLVLSLLITPASTAYLLVKRLHQVIILGVGIGTLSSISGMY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ISYFYNLPSGPAIVLVSFGLFILAFLFSPTQGIFTHPPSISSQPSIWRELKSLIKSN HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLEKLVEPLQYSFMQRSLLVAIIVGIICAVVGSYLMVQRLALLGDAISHSVLPGLAIAFW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGANIFIGAFIAGIISTILINLIRTRSSIKEDAAMGIVFSAFFALGITLMTIIQKDNKID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LNHFLFGNILGVTVGDVRDTLIIGIIVLLVVILLYKELLFYTFDPLGAQAVGLPVNLLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHH GLMMLIGLTIVASLKAVGVVLVLSLLITPASTAYLLVKRLHQVIILGVGIGTLSSISGMY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ISYFYNLPSGPAIVLVSFGLFILAFLFSPTQGIFTHPPSISSQPSIWRELKSLIKSN HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]