Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476801

Identifier: 113476801

GI number: 113476801

Start: 5028950

End: 5030623

Strand: Reverse

Name: 113476801

Synonym: Tery_3277

Alternate gene names: NA

Gene position: 5030623-5028950 (Counterclockwise)

Preceding gene: 113476805

Following gene: 113476800

Centisome position: 64.91

GC content: 27.6

Gene sequence:

>1674_bases
ATGGCAACTATGGAATCATTTTCACTCATAGATACAATAGTTAAAGAATTAGAAAAAGATGTAGATTTAATGAGGATAAA
GAAAGTAATTTATTGGGCTTGTGACAACGTATGGGAGGATAATGAAACCAAGTTAGAAAGAGTTAATATGAAGAAGTTAA
TAGAAAAGTTATACAATCAAATAGAAAATATAGATTCATTAAATGCTCGATTGTGTGAGATAGTTTCTAAAGTTAATAAA
AAAACAGAATATAGTTTGTTAGCACAAAAAATTATTAACAGTATAGGTAAATTATATCCTCAAGAAGAAGAGACGACTGT
TATGGAATATATTCCTAACAGGAGTCTTACTGTTTTAGATGACCAAATCGTTTTAACAAATAAATTAGTAGTAGAAGAAT
CATACCCAAGAGATCCTGGAGAATTATTTGATGTGCGAGAAAAAATTATGCAGGGTACTAATCCATTAAAGGCAAAAATT
CTGATTTTTTCGGCTGTACAACATCAATTTGATTTTGGTAATAAGGATTGGTTATTGTTGAGAACAAAAAACTTAGATAG
TTTACTTAGACAAATATTTAATTTATGCTTATCTATAACAGATTTAGAGTCTTCTTTATATGCTACTGCTAATAATTTTG
AAGACCCAGATGAATATACCCAAGTAGCCGATATAGTTATTAAGGCTTTAAACCTTTGCTATTCAGATGAAATTATAGTT
CCTCAAAGTCAAGCAGAAGCTGAAAAATTTGAAACATCAATATTAGATACAAAAAAAATTAATATGGAGGATAATAGTTA
TTTTGATAAAGACGATATGACTCTGCTAAATCTAACAAATTTGCCAGCTATAAACTCTACAGATAAAATTAGCTTTACCC
CAGAAGAATATTCTATAATTTACTCTGAAAAAACTAATGCCTACAAAGATAAAATTATTGATGAAACCACAAATAAAGCA
GAGGAAAAAACTCTTGAAAACTCTTTAATTTATAATCAAAAAATAGTTCCTATTTCCCAAGAACAAAAACCTGCTATAGG
AGGAAACAATATCTTAGATTCTATCAAACAAAAACTCAGGATAGAAGATAAAATATCTACTATTGTCAATAAAAAAGTAG
ATGTTGTAATGGATGCTATAGAAGCGGAATTTATTTCCTTAGAAAAAACTTTAAATCATTTTTTACAAGGTGAAACAGAA
AAAAAACGTTTATTATTAAAATATACAGCCTTAGGGAATTTGATTAGTAATATACAGGAAAAATATACAAAATATCAAGA
AATTCTCAAGGAATTGGAAAAAGAAGAAAGGAAAAAACTTAATCTCAATAATTCAGCTAATACTATTAGTCAAAAATCAT
ATAAACAAACAAAAATTTATGATGAAAATCAACAAAAAATTATTGAATTAGCAACTCAAGGAAATCCTAAGGCAATGGCT
ATGATAATTAATCAATTACTTGAGCAAAAAGGTATCACAGCCATAGCTGGTAGGAAAAATGATTATATACATATTGTTTT
AGAATCAGAACAGGTTCCTAATCCAGAAATTGTCACTCCACTAGTAGAGCAAAAAATTGCTAGTTTACAATCAAAATATC
TCAAAAATGTCAAAATTCATGGGAGACAATTAGGAAATAAATCAGTTATATGGACAAAAACAATTTCATTGTAA

Upstream 100 bases:

>100_bases
TTTTTGGATAAAACTGATAATTATCAGCAAATTTATTGAAGATTTCAAGAATTATAAAAATTAGTAAAATATTTGAACGA
TTCTTCAGGAATAAAAAATT

Downstream 100 bases:

>100_bases
ATTTTTCTGTTTTAGGAAATAGGTATGGATTAAGATAACTCGAGAAGGTTAATCCTGCAAAAATTGTATTTCCTTTATAT
TAACTTGTTATACCAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MATMESFSLIDTIVKELEKDVDLMRIKKVIYWACDNVWEDNETKLERVNMKKLIEKLYNQIENIDSLNARLCEIVSKVNK
KTEYSLLAQKIINSIGKLYPQEEETTVMEYIPNRSLTVLDDQIVLTNKLVVEESYPRDPGELFDVREKIMQGTNPLKAKI
LIFSAVQHQFDFGNKDWLLLRTKNLDSLLRQIFNLCLSITDLESSLYATANNFEDPDEYTQVADIVIKALNLCYSDEIIV
PQSQAEAEKFETSILDTKKINMEDNSYFDKDDMTLLNLTNLPAINSTDKISFTPEEYSIIYSEKTNAYKDKIIDETTNKA
EEKTLENSLIYNQKIVPISQEQKPAIGGNNILDSIKQKLRIEDKISTIVNKKVDVVMDAIEAEFISLEKTLNHFLQGETE
KKRLLLKYTALGNLISNIQEKYTKYQEILKELEKEERKKLNLNNSANTISQKSYKQTKIYDENQQKIIELATQGNPKAMA
MIINQLLEQKGITAIAGRKNDYIHIVLESEQVPNPEIVTPLVEQKIASLQSKYLKNVKIHGRQLGNKSVIWTKTISL

Sequences:

>Translated_557_residues
MATMESFSLIDTIVKELEKDVDLMRIKKVIYWACDNVWEDNETKLERVNMKKLIEKLYNQIENIDSLNARLCEIVSKVNK
KTEYSLLAQKIINSIGKLYPQEEETTVMEYIPNRSLTVLDDQIVLTNKLVVEESYPRDPGELFDVREKIMQGTNPLKAKI
LIFSAVQHQFDFGNKDWLLLRTKNLDSLLRQIFNLCLSITDLESSLYATANNFEDPDEYTQVADIVIKALNLCYSDEIIV
PQSQAEAEKFETSILDTKKINMEDNSYFDKDDMTLLNLTNLPAINSTDKISFTPEEYSIIYSEKTNAYKDKIIDETTNKA
EEKTLENSLIYNQKIVPISQEQKPAIGGNNILDSIKQKLRIEDKISTIVNKKVDVVMDAIEAEFISLEKTLNHFLQGETE
KKRLLLKYTALGNLISNIQEKYTKYQEILKELEKEERKKLNLNNSANTISQKSYKQTKIYDENQQKIIELATQGNPKAMA
MIINQLLEQKGITAIAGRKNDYIHIVLESEQVPNPEIVTPLVEQKIASLQSKYLKNVKIHGRQLGNKSVIWTKTISL
>Mature_556_residues
ATMESFSLIDTIVKELEKDVDLMRIKKVIYWACDNVWEDNETKLERVNMKKLIEKLYNQIENIDSLNARLCEIVSKVNKK
TEYSLLAQKIINSIGKLYPQEEETTVMEYIPNRSLTVLDDQIVLTNKLVVEESYPRDPGELFDVREKIMQGTNPLKAKIL
IFSAVQHQFDFGNKDWLLLRTKNLDSLLRQIFNLCLSITDLESSLYATANNFEDPDEYTQVADIVIKALNLCYSDEIIVP
QSQAEAEKFETSILDTKKINMEDNSYFDKDDMTLLNLTNLPAINSTDKISFTPEEYSIIYSEKTNAYKDKIIDETTNKAE
EKTLENSLIYNQKIVPISQEQKPAIGGNNILDSIKQKLRIEDKISTIVNKKVDVVMDAIEAEFISLEKTLNHFLQGETEK
KRLLLKYTALGNLISNIQEKYTKYQEILKELEKEERKKLNLNNSANTISQKSYKQTKIYDENQQKIIELATQGNPKAMAM
IINQLLEQKGITAIAGRKNDYIHIVLESEQVPNPEIVTPLVEQKIASLQSKYLKNVKIHGRQLGNKSVIWTKTISL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64104; Mature: 63973

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMESFSLIDTIVKELEKDVDLMRIKKVIYWACDNVWEDNETKLERVNMKKLIEKLYNQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IENIDSLNARLCEIVSKVNKKTEYSLLAQKIINSIGKLYPQEEETTVMEYIPNRSLTVLD
HHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEC
DQIVLTNKLVVEESYPRDPGELFDVREKIMQGTNPLKAKILIFSAVQHQFDFGNKDWLLL
CCEEEECEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
RTKNLDSLLRQIFNLCLSITDLESSLYATANNFEDPDEYTQVADIVIKALNLCYSDEIIV
EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEC
PQSQAEAEKFETSILDTKKINMEDNSYFDKDDMTLLNLTNLPAINSTDKISFTPEEYSII
CCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEE
YSEKTNAYKDKIIDETTNKAEEKTLENSLIYNQKIVPISQEQKPAIGGNNILDSIKQKLR
EECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
IEDKISTIVNKKVDVVMDAIEAEFISLEKTLNHFLQGETEKKRLLLKYTALGNLISNIQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KYTKYQEILKELEKEERKKLNLNNSANTISQKSYKQTKIYDENQQKIIELATQGNPKAMA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH
MIINQLLEQKGITAIAGRKNDYIHIVLESEQVPNPEIVTPLVEQKIASLQSKYLKNVKIH
HHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRQLGNKSVIWTKTISL
HHCCCCCCEEEEEECCC
>Mature Secondary Structure 
ATMESFSLIDTIVKELEKDVDLMRIKKVIYWACDNVWEDNETKLERVNMKKLIEKLYNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IENIDSLNARLCEIVSKVNKKTEYSLLAQKIINSIGKLYPQEEETTVMEYIPNRSLTVLD
HHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEC
DQIVLTNKLVVEESYPRDPGELFDVREKIMQGTNPLKAKILIFSAVQHQFDFGNKDWLLL
CCEEEECEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
RTKNLDSLLRQIFNLCLSITDLESSLYATANNFEDPDEYTQVADIVIKALNLCYSDEIIV
EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEC
PQSQAEAEKFETSILDTKKINMEDNSYFDKDDMTLLNLTNLPAINSTDKISFTPEEYSII
CCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEE
YSEKTNAYKDKIIDETTNKAEEKTLENSLIYNQKIVPISQEQKPAIGGNNILDSIKQKLR
EECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
IEDKISTIVNKKVDVVMDAIEAEFISLEKTLNHFLQGETEKKRLLLKYTALGNLISNIQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KYTKYQEILKELEKEERKKLNLNNSANTISQKSYKQTKIYDENQQKIIELATQGNPKAMA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH
MIINQLLEQKGITAIAGRKNDYIHIVLESEQVPNPEIVTPLVEQKIASLQSKYLKNVKIH
HHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRQLGNKSVIWTKTISL
HHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA