Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476797

Identifier: 113476797

GI number: 113476797

Start: 5020859

End: 5022115

Strand: Reverse

Name: 113476797

Synonym: Tery_3273

Alternate gene names: NA

Gene position: 5022115-5020859 (Counterclockwise)

Preceding gene: 113476798

Following gene: 113476795

Centisome position: 64.8

GC content: 37.87

Gene sequence:

>1257_bases
ATGGTTTCTACTACAAGTGCTAGTTTAAGAAATTATGCCCTAGTAACTCTTGCCTACTGGGGTTTCACCATTACTGATGG
TGCTTTGCGAATGTTGGTGCTACTTTACTTCTACAAAATTGGTTATACTCCTCTAGAAATAGCCTTTTTATTCTTATTCT
ATGAAGTTTTTGGCATCTTTACTAATTTTTTCGGTGGTTGGATAGGTTCACAACTTGGATTAAGAGTGACTCTGTACAGT
GGTATTGGGTTACAGATTTTTGCCCTAATTATGCTTTCATGGGTAAACCTAGGTTGGGTACAGTGGTTAGCTGTGTTTTA
TGTAATGGTAGCACAGGCATTTTCTGGAATTGCTAAAGATTTAACTAAAATGAGCTCTAAAAGTGCTATTAGGTTAGTTG
TACCCCAAGATGCTCAGTCCTCTCTATTTAAGTGGGTAGCTGTGTTAACTGGTTCCAAGAATGCTCTTAAAGGGGCTGGT
TTTTTTGTAGGTAGTGCGCTACTGTCATTATTTGGATTTGTCAATGCTCTGTGGATAATGGCGGGAGGACTATTTTTGAT
TATGTTAACTGGCTTAATTCTACCAAAAAACATGGGCAAAATTAAGAGGAAGGTCAAGTTTAAAGAACTTTTTTCTAAAA
GTCAGGAAATTAATATTCTTTCTGGTGCTCGCTTCTTTTTATTTGGTTCGCGAGATGTCTGGTTTGTAGTAGGGTTACCT
GTTTTTCTGCAAGGTACTTTGGGTTGGTCTTTTTATGAAGTTGGTGGTTTTATGGCTTGTTGGGTCATAGGTTATGGTAT
TATTCAATCTTTAGCACCGACTCTTATACAGAAATTTGGTTCTGGTAAGCCTCCACAATCAAAAACTATCCAATTTTGGA
CGTTTACATTGACTGCTGTTCCTTGCGTGATCGCTCTGGCATTACAATTAGGTTTACCTGCTAATTTGGTAGTTGTTGGT
GGTTTAATGTTGTTTGGTATAGTATTTGCTTTTAATTCTGCTGTTCATTCCTACCTGGTATTGGCATTTACTGATGATGA
CAAAGTAGCTCTAAATGTTGGTTTCTACTATATGGCTAATTCCGGTGGTCGTCTTGCAGGTACAGTTTTATCGGGGTTAG
TTTATCAAATATTTGGTTTGGTTGGTTGTCTGTGGGTATCCATGTTATTTGTATTAGGAGCAGCTTTAGTTTCTCTAAAG
TTACCGGAGGCTAAACCTAGTAAAGCTATAGCTTGGCAAGCTGGGTCTGGAGATTAA

Upstream 100 bases:

>100_bases
AGTTGGAAATCTGGTTTGAGTTTCTAATGATTTAGATCTCTTCAGAATTGAAGGTTTAATTTTAGGAAATTGGTTGCAAT
AGTTTAAATTCATTAAAATT

Downstream 100 bases:

>100_bases
TTTATCTATGGTTGAATATTTGGAGGCTGAATATCTACGAGAAGGTAAAGAAAGTGACCAGTTTAGATTTGTTACTATCT
AGAATAACTTTATAGTAGTT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MVSTTSASLRNYALVTLAYWGFTITDGALRMLVLLYFYKIGYTPLEIAFLFLFYEVFGIFTNFFGGWIGSQLGLRVTLYS
GIGLQIFALIMLSWVNLGWVQWLAVFYVMVAQAFSGIAKDLTKMSSKSAIRLVVPQDAQSSLFKWVAVLTGSKNALKGAG
FFVGSALLSLFGFVNALWIMAGGLFLIMLTGLILPKNMGKIKRKVKFKELFSKSQEINILSGARFFLFGSRDVWFVVGLP
VFLQGTLGWSFYEVGGFMACWVIGYGIIQSLAPTLIQKFGSGKPPQSKTIQFWTFTLTAVPCVIALALQLGLPANLVVVG
GLMLFGIVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMANSGGRLAGTVLSGLVYQIFGLVGCLWVSMLFVLGAALVSLK
LPEAKPSKAIAWQAGSGD

Sequences:

>Translated_418_residues
MVSTTSASLRNYALVTLAYWGFTITDGALRMLVLLYFYKIGYTPLEIAFLFLFYEVFGIFTNFFGGWIGSQLGLRVTLYS
GIGLQIFALIMLSWVNLGWVQWLAVFYVMVAQAFSGIAKDLTKMSSKSAIRLVVPQDAQSSLFKWVAVLTGSKNALKGAG
FFVGSALLSLFGFVNALWIMAGGLFLIMLTGLILPKNMGKIKRKVKFKELFSKSQEINILSGARFFLFGSRDVWFVVGLP
VFLQGTLGWSFYEVGGFMACWVIGYGIIQSLAPTLIQKFGSGKPPQSKTIQFWTFTLTAVPCVIALALQLGLPANLVVVG
GLMLFGIVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMANSGGRLAGTVLSGLVYQIFGLVGCLWVSMLFVLGAALVSLK
LPEAKPSKAIAWQAGSGD
>Mature_418_residues
MVSTTSASLRNYALVTLAYWGFTITDGALRMLVLLYFYKIGYTPLEIAFLFLFYEVFGIFTNFFGGWIGSQLGLRVTLYS
GIGLQIFALIMLSWVNLGWVQWLAVFYVMVAQAFSGIAKDLTKMSSKSAIRLVVPQDAQSSLFKWVAVLTGSKNALKGAG
FFVGSALLSLFGFVNALWIMAGGLFLIMLTGLILPKNMGKIKRKVKFKELFSKSQEINILSGARFFLFGSRDVWFVVGLP
VFLQGTLGWSFYEVGGFMACWVIGYGIIQSLAPTLIQKFGSGKPPQSKTIQFWTFTLTAVPCVIALALQLGLPANLVVVG
GLMLFGIVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMANSGGRLAGTVLSGLVYQIFGLVGCLWVSMLFVLGAALVSLK
LPEAKPSKAIAWQAGSGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45545; Mature: 45545

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTTSASLRNYALVTLAYWGFTITDGALRMLVLLYFYKIGYTPLEIAFLFLFYEVFGIF
CCCCCCHHHHHHHEEEHHHHCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TNFFGGWIGSQLGLRVTLYSGIGLQIFALIMLSWVNLGWVQWLAVFYVMVAQAFSGIAKD
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKMSSKSAIRLVVPQDAQSSLFKWVAVLTGSKNALKGAGFFVGSALLSLFGFVNALWIM
HHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGLFLIMLTGLILPKNMGKIKRKVKFKELFSKSQEINILSGARFFLFGSRDVWFVVGLP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCEEEEECHH
VFLQGTLGWSFYEVGGFMACWVIGYGIIQSLAPTLIQKFGSGKPPQSKTIQFWTFTLTAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
PCVIALALQLGLPANLVVVGGLMLFGIVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMAN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEEC
SGGRLAGTVLSGLVYQIFGLVGCLWVSMLFVLGAALVSLKLPEAKPSKAIAWQAGSGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MVSTTSASLRNYALVTLAYWGFTITDGALRMLVLLYFYKIGYTPLEIAFLFLFYEVFGIF
CCCCCCHHHHHHHEEEHHHHCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TNFFGGWIGSQLGLRVTLYSGIGLQIFALIMLSWVNLGWVQWLAVFYVMVAQAFSGIAKD
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKMSSKSAIRLVVPQDAQSSLFKWVAVLTGSKNALKGAGFFVGSALLSLFGFVNALWIM
HHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGLFLIMLTGLILPKNMGKIKRKVKFKELFSKSQEINILSGARFFLFGSRDVWFVVGLP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCEEEEECHH
VFLQGTLGWSFYEVGGFMACWVIGYGIIQSLAPTLIQKFGSGKPPQSKTIQFWTFTLTAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
PCVIALALQLGLPANLVVVGGLMLFGIVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMAN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEEC
SGGRLAGTVLSGLVYQIFGLVGCLWVSMLFVLGAALVSLKLPEAKPSKAIAWQAGSGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA