Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476784

Identifier: 113476784

GI number: 113476784

Start: 4997785

End: 4998891

Strand: Reverse

Name: 113476784

Synonym: Tery_3259

Alternate gene names: NA

Gene position: 4998891-4997785 (Counterclockwise)

Preceding gene: 113476785

Following gene: 113476780

Centisome position: 64.5

GC content: 42.37

Gene sequence:

>1107_bases
ATGCGACGAGGACAATTTAAATCTCTAATTCCATTATTAAGCGGGGTAACTTTAGTAGGTATCTTAGCCAGACCCGTAAG
TCCTGTTATCCCCGGTGTTAACTTTCTGATGATTCTGAGTCCACCAGGGCAGGTCAAACTCAAACGTCCCCATTGGCAAA
AATATCAGCCAATAATAATAGGAACTCCCCTGAGAAATGAAGACCGCTTACTCCTCCCCAAGGGAGCCCAAGCTGAAGTA
CTGTGTCAGAATTTGACGGAATGGAAAGTTCCCGATGGCAGAGAATCTATTGTTAGTGAAGGGTGTCCCCCTGTGAGTAA
CCCCAAACTGAGGGAGCTAGGTAAGGTTACTGCAGATAGCCGGGCTATCAACGATCCCAAAATTCCCTATATTCTCAGTC
CCAGGAATACAAAATTGTTGCCTACTCAGTCCTTAACTTTGCGATGGAACCAGGTTGAGGGAGCTAAAAATTATCGCGTG
GAGCTGGTAGGTCCAGGTGTGAATTTGAATCAGGAAACAAGGGAAAACCAGCTAGTTTATACAGCGAAGCCACCCTTGAA
ACGGGGAGTTCGTTACTGGTTCAATGTGGTAACGGATAAAAATAAAACTTCAACATTTGAGGGAACTCCTGGATTTACTA
TTCTTTCAGAGAAAGAAGTCAAAGAGACATTGGGTGCAGTTGAAGAAATCAAGCAGAAGCAACTGAGTCGGGAAGCTCAA
GCACTCGCTATCGCCCGCTTGTATCAAAGTAAAGAACTGTATAACGAAGCCATCAAACCGCTGGAAACTGCAATTCAAGA
TGGTATTAAATCTACAGCCATCTATCAACTCTTAGGAGAAATTCATCAAAAAATTGGATTAAATAGATTAGCACGCCTAT
ACTACCTAAAAGCTCTGAAGCTAACCAAACCTGAAGCAGATTTGGAAGGTTTAGCAAATATCCAGGGGGGATTAGCTATC
ACCAATGCAATTATAAGATATAAGGATGATGCACTGAAGTATTTGGAATATGCCAAAGCTAGCTATAAGAAGCTTGAGCG
GAAGAAAGAGCAGGAAAAAACAGTTCGTAAACTAGAAGCAGAAGTAAGCCGTATTTTAGGAATATGA

Upstream 100 bases:

>100_bases
AACAATGGCAGAAATGCTGTCAGTTAGGTTCCGTATTCAACCCAGATGAAAGTAAATGGCTCAGTTCAGCCCATAAAAAA
TTAAAGGAGGCAGGAAAATC

Downstream 100 bases:

>100_bases
GAGTAGAGGAGTGGAGAAGTAGGGGAATAGGGAATAGATGATCAAATTAATTCACTACACTGCAAATTCTGTGTGCATAG
CAACTTCTTGCAGATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MRRGQFKSLIPLLSGVTLVGILARPVSPVIPGVNFLMILSPPGQVKLKRPHWQKYQPIIIGTPLRNEDRLLLPKGAQAEV
LCQNLTEWKVPDGRESIVSEGCPPVSNPKLRELGKVTADSRAINDPKIPYILSPRNTKLLPTQSLTLRWNQVEGAKNYRV
ELVGPGVNLNQETRENQLVYTAKPPLKRGVRYWFNVVTDKNKTSTFEGTPGFTILSEKEVKETLGAVEEIKQKQLSREAQ
ALAIARLYQSKELYNEAIKPLETAIQDGIKSTAIYQLLGEIHQKIGLNRLARLYYLKALKLTKPEADLEGLANIQGGLAI
TNAIIRYKDDALKYLEYAKASYKKLERKKEQEKTVRKLEAEVSRILGI

Sequences:

>Translated_368_residues
MRRGQFKSLIPLLSGVTLVGILARPVSPVIPGVNFLMILSPPGQVKLKRPHWQKYQPIIIGTPLRNEDRLLLPKGAQAEV
LCQNLTEWKVPDGRESIVSEGCPPVSNPKLRELGKVTADSRAINDPKIPYILSPRNTKLLPTQSLTLRWNQVEGAKNYRV
ELVGPGVNLNQETRENQLVYTAKPPLKRGVRYWFNVVTDKNKTSTFEGTPGFTILSEKEVKETLGAVEEIKQKQLSREAQ
ALAIARLYQSKELYNEAIKPLETAIQDGIKSTAIYQLLGEIHQKIGLNRLARLYYLKALKLTKPEADLEGLANIQGGLAI
TNAIIRYKDDALKYLEYAKASYKKLERKKEQEKTVRKLEAEVSRILGI
>Mature_368_residues
MRRGQFKSLIPLLSGVTLVGILARPVSPVIPGVNFLMILSPPGQVKLKRPHWQKYQPIIIGTPLRNEDRLLLPKGAQAEV
LCQNLTEWKVPDGRESIVSEGCPPVSNPKLRELGKVTADSRAINDPKIPYILSPRNTKLLPTQSLTLRWNQVEGAKNYRV
ELVGPGVNLNQETRENQLVYTAKPPLKRGVRYWFNVVTDKNKTSTFEGTPGFTILSEKEVKETLGAVEEIKQKQLSREAQ
ALAIARLYQSKELYNEAIKPLETAIQDGIKSTAIYQLLGEIHQKIGLNRLARLYYLKALKLTKPEADLEGLANIQGGLAI
TNAIIRYKDDALKYLEYAKASYKKLERKKEQEKTVRKLEAEVSRILGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41393; Mature: 41393

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGQFKSLIPLLSGVTLVGILARPVSPVIPGVNFLMILSPPGQVKLKRPHWQKYQPIII
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCEEEECCCCCCCCCEEE
GTPLRNEDRLLLPKGAQAEVLCQNLTEWKVPDGRESIVSEGCPPVSNPKLRELGKVTADS
ECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCC
RAINDPKIPYILSPRNTKLLPTQSLTLRWNQVEGAKNYRVELVGPGVNLNQETRENQLVY
CCCCCCCCCEEECCCCCEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEE
TAKPPLKRGVRYWFNVVTDKNKTSTFEGTPGFTILSEKEVKETLGAVEEIKQKQLSREAQ
ECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
ALAIARLYQSKELYNEAIKPLETAIQDGIKSTAIYQLLGEIHQKIGLNRLARLYYLKALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKPEADLEGLANIQGGLAITNAIIRYKDDALKYLEYAKASYKKLERKKEQEKTVRKLEA
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVSRILGI
HHHHHHCC
>Mature Secondary Structure
MRRGQFKSLIPLLSGVTLVGILARPVSPVIPGVNFLMILSPPGQVKLKRPHWQKYQPIII
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCEEEECCCCCCCCCEEE
GTPLRNEDRLLLPKGAQAEVLCQNLTEWKVPDGRESIVSEGCPPVSNPKLRELGKVTADS
ECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCC
RAINDPKIPYILSPRNTKLLPTQSLTLRWNQVEGAKNYRVELVGPGVNLNQETRENQLVY
CCCCCCCCCEEECCCCCEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEE
TAKPPLKRGVRYWFNVVTDKNKTSTFEGTPGFTILSEKEVKETLGAVEEIKQKQLSREAQ
ECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
ALAIARLYQSKELYNEAIKPLETAIQDGIKSTAIYQLLGEIHQKIGLNRLARLYYLKALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKPEADLEGLANIQGGLAITNAIIRYKDDALKYLEYAKASYKKLERKKEQEKTVRKLEA
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVSRILGI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA