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The map label for this gene is yebA [C]

Identifier: 113476780

GI number: 113476780

Start: 4991854

End: 4992558

Strand: Reverse

Name: yebA [C]

Synonym: Tery_3254

Alternate gene names: 113476780

Gene position: 4992558-4991854 (Counterclockwise)

Preceding gene: 113476784

Following gene: 113476778

Centisome position: 64.42

GC content: 40.14

Gene sequence:

>705_bases
ATGTTAGTTCCTGGAAAAAAACTCTTATATAAATTCCCTATAGCCTTAAAACAGGGTTTACGTCACCCCCAAAAACAAAA
AAAAATATTACTATTAGGATTTATGGCACTTGGTATAGCCACCTTAGGAATTAAACAAGAATTAGTCAAAGCACAAGGAG
TCAAAACTACCAATCAACAAATATCATACATTAAAAACTGGCAAAATGCCTCTTTCCCCGTAGAAAACTTTCAAGGATAC
ACATCAGCTTTTGGTCCTCGTGGTAGAGGTTTTCATTATGGGTTAGACTTAGCAGCTCCCCAAGGAAGCTATATCCGAAG
TTGGTGGACCGGCACAGTGATGGAAGTTTGGGAAGATCGTCGTTGCGGTACTGGTATTATAATTAAGTCAGGTTCTTGGG
AACACGTTTACTGTCACGTTCAAGGAAAAGTAGAAACTCACAATGGACATCGCTATCTAATAGATCGTGGTGGTGGAATT
ATGCTACCTCAAGGTCAAGTTTTGCCTGCTGGGAGTCGAATAGCTAGAGTCGGAATGACTGGTAGAACCAGTGGCCCCCA
TCTTCATTGGGGTTTGAAATATGGAGGACGTTGGGTAGACCCTGCTTTGATTTTGCGAGAAATGTATACTCAACAAACTA
AACAGTTATCAAGCTTAGAACATAGATATAGTGCTAAGTACAACTCACACGCAAGCTATAACTAA

Upstream 100 bases:

>100_bases
TGAGTGCTAATAGTCAGTTAATACCTTATAGCTTATAAGTATAAACTGAATGCTTAGATCAAATCATCTATTCCCATCAA
TTATTTAAAAGTAAGGAAAT

Downstream 100 bases:

>100_bases
GTTTTTGGTGCCTAAATGCTTACCTACACGATGATATAGAAACCTAAATAGAATATTGTCAATAGCTATGATAGATGCGG
CAGGACGAACCATACAAATA

Product: peptidase M23B

Products: NA

Alternate protein names: Peptidase; M23 Peptidase Domain Protein; LysM Domain/M23/M37 Peptidase Domain Protein; M23 Peptidase Domain-Containing Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLVPGKKLLYKFPIALKQGLRHPQKQKKILLLGFMALGIATLGIKQELVKAQGVKTTNQQISYIKNWQNASFPVENFQGY
TSAFGPRGRGFHYGLDLAAPQGSYIRSWWTGTVMEVWEDRRCGTGIIIKSGSWEHVYCHVQGKVETHNGHRYLIDRGGGI
MLPQGQVLPAGSRIARVGMTGRTSGPHLHWGLKYGGRWVDPALILREMYTQQTKQLSSLEHRYSAKYNSHASYN

Sequences:

>Translated_234_residues
MLVPGKKLLYKFPIALKQGLRHPQKQKKILLLGFMALGIATLGIKQELVKAQGVKTTNQQISYIKNWQNASFPVENFQGY
TSAFGPRGRGFHYGLDLAAPQGSYIRSWWTGTVMEVWEDRRCGTGIIIKSGSWEHVYCHVQGKVETHNGHRYLIDRGGGI
MLPQGQVLPAGSRIARVGMTGRTSGPHLHWGLKYGGRWVDPALILREMYTQQTKQLSSLEHRYSAKYNSHASYN
>Mature_234_residues
MLVPGKKLLYKFPIALKQGLRHPQKQKKILLLGFMALGIATLGIKQELVKAQGVKTTNQQISYIKNWQNASFPVENFQGY
TSAFGPRGRGFHYGLDLAAPQGSYIRSWWTGTVMEVWEDRRCGTGIIIKSGSWEHVYCHVQGKVETHNGHRYLIDRGGGI
MLPQGQVLPAGSRIARVGMTGRTSGPHLHWGLKYGGRWVDPALILREMYTQQTKQLSSLEHRYSAKYNSHASYN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 26353; Mature: 26353

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVPGKKLLYKFPIALKQGLRHPQKQKKILLLGFMALGIATLGIKQELVKAQGVKTTNQQ
CCCCCHHHHHCCCHHHHHHCCCCHHHHHEHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ISYIKNWQNASFPVENFQGYTSAFGPRGRGFHYGLDLAAPQGSYIRSWWTGTVMEVWEDR
HHHHHCCCCCCCCHHHCCCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHCHHHHHHHHCC
RCGTGIIIKSGSWEHVYCHVQGKVETHNGHRYLIDRGGGIMLPQGQVLPAGSRIARVGMT
CCCCEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCEEECCCCCEECCCCCEEEECCC
GRTSGPHLHWGLKYGGRWVDPALILREMYTQQTKQLSSLEHRYSAKYNSHASYN
CCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLVPGKKLLYKFPIALKQGLRHPQKQKKILLLGFMALGIATLGIKQELVKAQGVKTTNQQ
CCCCCHHHHHCCCHHHHHHCCCCHHHHHEHEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ISYIKNWQNASFPVENFQGYTSAFGPRGRGFHYGLDLAAPQGSYIRSWWTGTVMEVWEDR
HHHHHCCCCCCCCHHHCCCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHCHHHHHHHHCC
RCGTGIIIKSGSWEHVYCHVQGKVETHNGHRYLIDRGGGIMLPQGQVLPAGSRIARVGMT
CCCCEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCEEECCCCCEECCCCCEEEECCC
GRTSGPHLHWGLKYGGRWVDPALILREMYTQQTKQLSSLEHRYSAKYNSHASYN
CCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA