| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476763
Identifier: 113476763
GI number: 113476763
Start: 4953926
End: 4954645
Strand: Reverse
Name: 113476763
Synonym: Tery_3236
Alternate gene names: NA
Gene position: 4954645-4953926 (Counterclockwise)
Preceding gene: 113476764
Following gene: 113476761
Centisome position: 63.93
GC content: 36.81
Gene sequence:
>720_bases GTGAAAGAAGTCATCAAAAATCAAGGATATTGCTATACCTGCGATCGAGAAGTAGTATTTTCTTCTGAACAAGCTTGGTT AAGAGATTGGTATAAATGTAGCAATTGCGGATCGATTCCTAGAGAAAGAGCATTGATGTATGTTATAGAAAAGTTTTACC CAAAATGGAAAAAACTTTCTATACATGAGTCTTCACCGGGAAATAGAGGGGCGAGCGTCAAACTGAAAAAATACTGCGCC AAATATTTCGCAAGTCAATACTTGCCTGGACTTCCTTTCGGTGAAACTAATAGTAACGGGTGGAGAAATGAAGATTTGGA AAATCAAACATTTGCCGATGAAAGTTTCGATCTTGTTATTTCTCAAGATGTGATGGAGCATATTTTTAATCCTGAAAAAG CTTTTTCGGAAATTGCTCGAACTTTGAAACCCGGGGGAGCACACATATTTACTGTACCAATAGTAAACAAGGAAAATCCT TCCAGCATTCGTGCTATGTTAGAAGCTAATGGTAAAATAAATTATTTATGCGAAGCACAATATCACGGCAATCCAGTCAG TGCAGAAGGTTCTCTACTAACCAGGGATTGGGGCTATGACATTTGCGATTTTATTCTTAAAAATAGCGGTTTATATACCA CAATTGTTGACATAGACAATACTTTCCTGGGTATTAGAGCTGAGTATATAGAGGTTTTAGTAAGTAGGAAGTTAGTATGA
Upstream 100 bases:
>100_bases AATAATTTAAAACACGTCCTTTCTTTCAGTCAAAAATAAGGCAACGCAAAAATTAGCTAGGCATAAAATCTTAAGTTAAA AATTATTAGAGAAAACTAAC
Downstream 100 bases:
>100_bases CTAAGATGATGGTAGTATTTTCTTGTATTTGACAATTCCCAGGGGCAAGCGGTTATCATCTGAAAATACAGCTTCTATCG ATAATTCTGCTTCTACAGGC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase And Glycosyltransferase
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKEVIKNQGYCYTCDREVVFSSEQAWLRDWYKCSNCGSIPRERALMYVIEKFYPKWKKLSIHESSPGNRGASVKLKKYCA KYFASQYLPGLPFGETNSNGWRNEDLENQTFADESFDLVISQDVMEHIFNPEKAFSEIARTLKPGGAHIFTVPIVNKENP SSIRAMLEANGKINYLCEAQYHGNPVSAEGSLLTRDWGYDICDFILKNSGLYTTIVDIDNTFLGIRAEYIEVLVSRKLV
Sequences:
>Translated_239_residues MKEVIKNQGYCYTCDREVVFSSEQAWLRDWYKCSNCGSIPRERALMYVIEKFYPKWKKLSIHESSPGNRGASVKLKKYCA KYFASQYLPGLPFGETNSNGWRNEDLENQTFADESFDLVISQDVMEHIFNPEKAFSEIARTLKPGGAHIFTVPIVNKENP SSIRAMLEANGKINYLCEAQYHGNPVSAEGSLLTRDWGYDICDFILKNSGLYTTIVDIDNTFLGIRAEYIEVLVSRKLV >Mature_239_residues MKEVIKNQGYCYTCDREVVFSSEQAWLRDWYKCSNCGSIPRERALMYVIEKFYPKWKKLSIHESSPGNRGASVKLKKYCA KYFASQYLPGLPFGETNSNGWRNEDLENQTFADESFDLVISQDVMEHIFNPEKAFSEIARTLKPGGAHIFTVPIVNKENP SSIRAMLEANGKINYLCEAQYHGNPVSAEGSLLTRDWGYDICDFILKNSGLYTTIVDIDNTFLGIRAEYIEVLVSRKLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27316; Mature: 27316
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVIKNQGYCYTCDREVVFSSEQAWLRDWYKCSNCGSIPRERALMYVIEKFYPKWKKLS CCHHHCCCCCEEECCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEE IHESSPGNRGASVKLKKYCAKYFASQYLPGLPFGETNSNGWRNEDLENQTFADESFDLVI EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEE SQDVMEHIFNPEKAFSEIARTLKPGGAHIFTVPIVNKENPSSIRAMLEANGKINYLCEAQ HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEC YHGNPVSAEGSLLTRDWGYDICDFILKNSGLYTTIVDIDNTFLGIRAEYIEVLVSRKLV CCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MKEVIKNQGYCYTCDREVVFSSEQAWLRDWYKCSNCGSIPRERALMYVIEKFYPKWKKLS CCHHHCCCCCEEECCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEE IHESSPGNRGASVKLKKYCAKYFASQYLPGLPFGETNSNGWRNEDLENQTFADESFDLVI EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEE SQDVMEHIFNPEKAFSEIARTLKPGGAHIFTVPIVNKENPSSIRAMLEANGKINYLCEAQ HHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEC YHGNPVSAEGSLLTRDWGYDICDFILKNSGLYTTIVDIDNTFLGIRAEYIEVLVSRKLV CCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA