Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476761

Identifier: 113476761

GI number: 113476761

Start: 4947996

End: 4949144

Strand: Reverse

Name: 113476761

Synonym: Tery_3232

Alternate gene names: NA

Gene position: 4949144-4947996 (Counterclockwise)

Preceding gene: 113476763

Following gene: 113476760

Centisome position: 63.86

GC content: 32.99

Gene sequence:

>1149_bases
ATGAAATTTATTAGCCCTAAAACCGACTTTGCTTTTAAAAAAATATTTGGTTCTATTCACAGTCAAAATATTCTCATTAG
CTTTCTTAATGCTATAGTTTATAATAATCAGAATATTATTCAATCTCTAGAAATAATTAATCCTTATAATCCTGGAGTTA
CGAACACTATTAAAGAGACTTATTTAGATGTAAAAGCAGTTTTAGATAATGGTTCTACTGTGATTATTGAAATGCAAGTA
TTAAACGTAGAAGATTTTGAAAAACGAGTAATTTATAATCTAGCTAAAGCTTATGGAAATCAATTAGAGGTAGGGCAAGG
TTATATGATGTTGACACCTTTTGTAGCTTTAACAATCGCCGATTTTGTTTTATTTGAAAACACAGATAAAATGATTACTA
AATTCCGATTTAAAGAAGAGACGGAGTTGTTTAATTACCAAGATGAATTAACTTTAATGTTTGTAGAATTACCCAAATTT
AAGAAAGAATTGTCAGTATTAGAAACCCTCAGTGATAAGTGGATATATTTTATTAGCTCGGCTCCAAATTTAGAAGTAAT
ACCTTCCTCTTTAGAAGAGGTATCAGAAATAGAGTCAGCATTAAATATAGCAAATATGGCTAACTTAAGTAATGAAGAAT
TAGAGGAATTAGAGCAACAAGAAAAGTTGATTAGAGATAAGAAAGGACAAATTAGTTTAGCCAGAAAGGAAGGTATAGAA
ATTGGGCGTGAGGAAGGTATTGGAATTGGAAGAGAAGAAGGTATTGGAATTGGAAGAGAAGAAGGTATTGGAATTGGACG
GGAGGAAGGCATTGGAATTGGAAGAGAAGAAGGTATTGGAATTGGAAGAGAAGAAGGTATTGGAATTGGACGGGAGGAAG
GCATTGGAATTGGAAGAGAAGAAGGTATTGGAATTGGAAGAGAAGAAGGTATTGGAATTGGACGGGAGGAAGGCATTGGA
ATTGGAAGAGAGGAAGGAATGAGAATATTAGTTAAACGTCAAATTCGCCGGAAGTTTGGGGAAGTGCCTCCAGAAGTTCA
GACTCAGATAGAGCAATTATCTTTGGAAAAGTTAGATATTTTAGGTGATGAAATTTTTGATTTAGCAATAATAGCAGACT
TAGAAAACTGGCTAGCTAATAATGGATGA

Upstream 100 bases:

>100_bases
ACCAATTCCAAATCCCAATTAAATCCTAAGCGATCGCTTTTTAATTATAATGAAATAGTGTAAAATAAATTATACTAGTT
CAGCAAAATAATAGATAACT

Downstream 100 bases:

>100_bases
TTGATAATGAATAATTGATAATTAAAGAGTCTTTTTTTTCTCTATTTTTCTATATAATTCTCGGAAAAAGTGTCGATCGC
TTTTTAATTATGATGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKFISPKTDFAFKKIFGSIHSQNILISFLNAIVYNNQNIIQSLEIINPYNPGVTNTIKETYLDVKAVLDNGSTVIIEMQV
LNVEDFEKRVIYNLAKAYGNQLEVGQGYMMLTPFVALTIADFVLFENTDKMITKFRFKEETELFNYQDELTLMFVELPKF
KKELSVLETLSDKWIYFISSAPNLEVIPSSLEEVSEIESALNIANMANLSNEELEELEQQEKLIRDKKGQISLARKEGIE
IGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIG
IGREEGMRILVKRQIRRKFGEVPPEVQTQIEQLSLEKLDILGDEIFDLAIIADLENWLANNG

Sequences:

>Translated_382_residues
MKFISPKTDFAFKKIFGSIHSQNILISFLNAIVYNNQNIIQSLEIINPYNPGVTNTIKETYLDVKAVLDNGSTVIIEMQV
LNVEDFEKRVIYNLAKAYGNQLEVGQGYMMLTPFVALTIADFVLFENTDKMITKFRFKEETELFNYQDELTLMFVELPKF
KKELSVLETLSDKWIYFISSAPNLEVIPSSLEEVSEIESALNIANMANLSNEELEELEQQEKLIRDKKGQISLARKEGIE
IGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIG
IGREEGMRILVKRQIRRKFGEVPPEVQTQIEQLSLEKLDILGDEIFDLAIIADLENWLANNG
>Mature_382_residues
MKFISPKTDFAFKKIFGSIHSQNILISFLNAIVYNNQNIIQSLEIINPYNPGVTNTIKETYLDVKAVLDNGSTVIIEMQV
LNVEDFEKRVIYNLAKAYGNQLEVGQGYMMLTPFVALTIADFVLFENTDKMITKFRFKEETELFNYQDELTLMFVELPKF
KKELSVLETLSDKWIYFISSAPNLEVIPSSLEEVSEIESALNIANMANLSNEELEELEQQEKLIRDKKGQISLARKEGIE
IGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIG
IGREEGMRILVKRQIRRKFGEVPPEVQTQIEQLSLEKLDILGDEIFDLAIIADLENWLANNG

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42779; Mature: 42779

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFISPKTDFAFKKIFGSIHSQNILISFLNAIVYNNQNIIQSLEIINPYNPGVTNTIKET
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHH
YLDVKAVLDNGSTVIIEMQVLNVEDFEKRVIYNLAKAYGNQLEVGQGYMMLTPFVALTIA
HHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHHCCCCEECCCCEEHHHHHHHHHHH
DFVLFENTDKMITKFRFKEETELFNYQDELTLMFVELPKFKKELSVLETLSDKWIYFISS
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEEC
APNLEVIPSSLEEVSEIESALNIANMANLSNEELEELEQQEKLIRDKKGQISLARKEGIE
CCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHCCC
IGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGRE
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EGIGIGREEGIGIGREEGIGIGREEGMRILVKRQIRRKFGEVPPEVQTQIEQLSLEKLDI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGDEIFDLAIIADLENWLANNG
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFISPKTDFAFKKIFGSIHSQNILISFLNAIVYNNQNIIQSLEIINPYNPGVTNTIKET
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHH
YLDVKAVLDNGSTVIIEMQVLNVEDFEKRVIYNLAKAYGNQLEVGQGYMMLTPFVALTIA
HHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHHCCCCEECCCCEEHHHHHHHHHHH
DFVLFENTDKMITKFRFKEETELFNYQDELTLMFVELPKFKKELSVLETLSDKWIYFISS
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEEC
APNLEVIPSSLEEVSEIESALNIANMANLSNEELEELEQQEKLIRDKKGQISLARKEGIE
CCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHCCC
IGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGREEGIGIGRE
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EGIGIGREEGIGIGREEGIGIGREEGMRILVKRQIRRKFGEVPPEVQTQIEQLSLEKLDI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGDEIFDLAIIADLENWLANNG
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA