| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476740
Identifier: 113476740
GI number: 113476740
Start: 4906362
End: 4906925
Strand: Reverse
Name: 113476740
Synonym: Tery_3209
Alternate gene names: NA
Gene position: 4906925-4906362 (Counterclockwise)
Preceding gene: 113476741
Following gene: 113476736
Centisome position: 63.31
GC content: 38.48
Gene sequence:
>564_bases ATGATGATCCAATTTCTTTCTAATTTTATTAAAAGAATCTCTATTATTAGTGTTATTGGTAGCAATTTAATGATAATCAC AATTTCCCAAGCTGGAGGGCCTCCACCAGACACGAAGCCCCCTATCGTTAATCAGCAAGAGGATACTTCTAATTCATCTA ATCATAGAGGAAAACCTGTAAAGGTCGAACCTAAGACTACCAAACCGACTCACCGTCAGTCTCCTACCCAACAGTCAGAG ACTACTGACTCTCCACCTGATAGGATCAGGTCAGACCTTGGTTTAATTACTCTCAGATTAATTAATCAGACCGGTGCCAT AATTGAATATCAGGTAATAGGTGGCCAATATATGACTCTAGGGGGAACTTCAGTGGTGGAATTATCTAAACTGTCAATTC CACTAACCTTAACCTATCAACGTCCTGATGGTGGGTTGATTTTGGTACGTTATCAGAGTATTTCTCCCACGGTATTAGAG GTTATATTTCACCCTACAGAAGATTTTGATTTAGATACTAACTCACTTAATATTAGTGGTAAAGGTCAGATATCTTTGAA CTAG
Upstream 100 bases:
>100_bases AATATCTTTATAAACGCTCCAACTTAGTCAGAGATTACTTCTGAGTTATGACATCTGACTTGCGCGTAGCGCCATAACCC CTAATTCCATATCCGACAAG
Downstream 100 bases:
>100_bases GTTAAAGAAGCGGTCATTTCATTTATCAGTTATTAGTTAACAGTACCAAGAGCTGAAGCCTCCTGCTTTCAATAATGAAT TGGATTTTTTTTCTGAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MMIQFLSNFIKRISIISVIGSNLMIITISQAGGPPPDTKPPIVNQQEDTSNSSNHRGKPVKVEPKTTKPTHRQSPTQQSE TTDSPPDRIRSDLGLITLRLINQTGAIIEYQVIGGQYMTLGGTSVVELSKLSIPLTLTYQRPDGGLILVRYQSISPTVLE VIFHPTEDFDLDTNSLNISGKGQISLN
Sequences:
>Translated_187_residues MMIQFLSNFIKRISIISVIGSNLMIITISQAGGPPPDTKPPIVNQQEDTSNSSNHRGKPVKVEPKTTKPTHRQSPTQQSE TTDSPPDRIRSDLGLITLRLINQTGAIIEYQVIGGQYMTLGGTSVVELSKLSIPLTLTYQRPDGGLILVRYQSISPTVLE VIFHPTEDFDLDTNSLNISGKGQISLN >Mature_187_residues MMIQFLSNFIKRISIISVIGSNLMIITISQAGGPPPDTKPPIVNQQEDTSNSSNHRGKPVKVEPKTTKPTHRQSPTQQSE TTDSPPDRIRSDLGLITLRLINQTGAIIEYQVIGGQYMTLGGTSVVELSKLSIPLTLTYQRPDGGLILVRYQSISPTVLE VIFHPTEDFDLDTNSLNISGKGQISLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20467; Mature: 20467
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIQFLSNFIKRISIISVIGSNLMIITISQAGGPPPDTKPPIVNQQEDTSNSSNHRGKPV CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE KVEPKTTKPTHRQSPTQQSETTDSPPDRIRSDLGLITLRLINQTGAIIEYQVIGGQYMTL EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEEE GGTSVVELSKLSIPLTLTYQRPDGGLILVRYQSISPTVLEVIFHPTEDFDLDTNSLNISG CCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECC KGQISLN CCEEEEC >Mature Secondary Structure MMIQFLSNFIKRISIISVIGSNLMIITISQAGGPPPDTKPPIVNQQEDTSNSSNHRGKPV CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE KVEPKTTKPTHRQSPTQQSETTDSPPDRIRSDLGLITLRLINQTGAIIEYQVIGGQYMTL EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEEE GGTSVVELSKLSIPLTLTYQRPDGGLILVRYQSISPTVLEVIFHPTEDFDLDTNSLNISG CCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECC KGQISLN CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA