| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476736
Identifier: 113476736
GI number: 113476736
Start: 4896943
End: 4897173
Strand: Reverse
Name: 113476736
Synonym: Tery_3203
Alternate gene names: NA
Gene position: 4897173-4896943 (Counterclockwise)
Preceding gene: 113476740
Following gene: 113476735
Centisome position: 63.19
GC content: 28.57
Gene sequence:
>231_bases ATGAACAATGGGAAAATCAATTTAGGAAAAATAGTGATAGAAATTATTGAAGAAGTTGGGGCTAGTTTGTTATTTTTATC TCCTTATTCACCTGAATTTTCTCCAATTGAAAACTTTTTTTCAAAAGCAAAAGCTATTCTAAGAAGAGTTAAAGTAAGAA ATTATCAAGGTTTAATTGATGCCATGACCTCAGCTATATTCAAAGTTAGTCAAAAAGATATTCGCAATTAG
Upstream 100 bases:
>100_bases GGCAAAAACAAATATTTATAGAGCAGCAGCTGGAGTAAATTTTGAGACTTTTATAGTTAAATAAGTAATCCTATGACTGT GAAATAAAGCTTGTTTTATA
Downstream 100 bases:
>100_bases TTTAACCATTGTTGTTACTTTACCTCATAGCTATGAGAATTGTTACATAAATAGAAAACTTCCTAAAATAGTTAGCAAAA ACCTTTAATGATAAGGATTT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MNNGKINLGKIVIEIIEEVGASLLFLSPYSPEFSPIENFFSKAKAILRRVKVRNYQGLIDAMTSAIFKVSQKDIRN
Sequences:
>Translated_76_residues MNNGKINLGKIVIEIIEEVGASLLFLSPYSPEFSPIENFFSKAKAILRRVKVRNYQGLIDAMTSAIFKVSQKDIRN >Mature_76_residues MNNGKINLGKIVIEIIEEVGASLLFLSPYSPEFSPIENFFSKAKAILRRVKVRNYQGLIDAMTSAIFKVSQKDIRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8573; Mature: 8573
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNGKINLGKIVIEIIEEVGASLLFLSPYSPEFSPIENFFSKAKAILRRVKVRNYQGLID CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMTSAIFKVSQKDIRN HHHHHHHHHHHHHCCC >Mature Secondary Structure MNNGKINLGKIVIEIIEEVGASLLFLSPYSPEFSPIENFFSKAKAILRRVKVRNYQGLID CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMTSAIFKVSQKDIRN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA