Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is glmM [H]

Identifier: 113476724

GI number: 113476724

Start: 4869558

End: 4872089

Strand: Reverse

Name: glmM [H]

Synonym: Tery_3188

Alternate gene names: 113476724

Gene position: 4872089-4869558 (Counterclockwise)

Preceding gene: 113476727

Following gene: 113476722

Centisome position: 62.86

GC content: 35.7

Gene sequence:

>2532_bases
ATGCGCGGAGTTTTGATGGCTGGAGGTTCAGGAACACGACTCAGACCACTGACTTGCGATCTTCCTAAACCAATGGTTCC
AATTTTAAATCGTCCAATAGCTGAACATATTATTAATCTATTAAAAAAACATCAAATTAGGGAGATTATTGCTACTTTAC
ATTATCTGCCTGATGTAATGCGTGAATATTTTCAAGATGGCAGTAAATTTGGAGTTCAGATGACATATTCTGTGGAAGAA
GAACAACCTCTAGGAACTGCTGGTTGTGTAAAAAATATTGCAGAACTTTTAGATGGAACATTTTTAGTAATTAGTGGAGA
TACAATTACAGACTTTGATTTAAGTGCAGCTATAGAATTTCATCAAAAACATAAGTCAAAAGCTACGTTAGTATTGACGC
GAGTTAATAATCCAATTGAATTTGGAGTAGTAATTACAGATGAAGAGCAGAGGATTAAAAGATTTCTAGAAAAACCTTCT
ACAAGTGAAGTATTTTCGGATACTGTTAATACAGGAACTTATATTTTAGAACCAGAAATTTTAGATTATTTACCAAGTAA
TCAAGAATGTGATTTCTCTAAAGAATTATTTCCTTTATTGTTAGATAAAAATGAGCCGATATATGGCTATATTGCTGAGG
GTTATTGGTGTGATGTTGGACATTTAGATTCTTATCGGAAAGCTCAATATGATGCACTTCAACACACAGTAAAACTTGAG
TTGCCTTATAAAGAGCGATCGCCAAATCTCTGGATAGGAGAAAATACTTATATTGACCCAACAGCTAAAATTGAGACTCC
GACTTTAATTGGAGATAACTGTAGAATTGGTCCGAGAGTTCATATTGAACTAGGTAGTGTCATAGGAGATAATGTAACAA
TTGGCGCAGATGCTAATGTCAAGCGTCCTATTGTTTGGAATGGTACACTGGTGGGAGAGGATACCAATTTACGAGGTTGT
GTAATTTGTAGAGGTTCTAGGATACATCGTCGTGCCCAAATCTTGGAAGGTGCTGTAGTTGGTTCTTTATCTACTGTGGG
AGAAGAAGCCCAAATTAGTCCTCATGTCAGAGTATGGCCTAGTAAAACAGTTGAATCAGGAGCCATTCTGAATATTAACT
TAATTTGGGGTACAACTGCCCAGAGAAACTTATTTGGACAACGTGGGGTGCAGGGATTAGCAAATATTGATATTACTCCA
GACTTTGCGGTTAAGTTAGGAGCTGCTTATGGTTCTACCTTAAAAAATGGTTCTACAGTATCAGTTTCTCGCGACCAACG
TAATATATCTCGGATGGTTTCTCGGTCTTTAATTGCTGGTTTAATGTCGGTGGGAATTAATGTAATCAATTTACAATCTA
CCGCTATTCCTATTGCCAGAACAATTTTACCCACCATGAATTTAGTGGGTGGCCTTCATGTACGTCTTTCTCCTGATCGC
TCAGATCAAATATTAATTGAAATCTTTGATTATCAAGGGATTAATATTTCAAAAGTGAAAGAAAAAAACATTGAAGGAGC
ATATTTTAAAGAAGATTTCCGCCGAGTACAAATATCAGAAATTGGCAATATGATTGATCGTCATGAAGTATTAAATGCTT
ATAGTAAAGGCTTTGAAAATCTTCTCAATTCTGAGGCAATTCGGTATAGTAAATCTAAGGTGGTAATTGACTATTGTTAT
GGTGTTTCGGGAGCAGTATTACCACAATTATTAACTAAATTTGGTTGTGATGCAGTAGTTCTAAATGCTAGTTTAAAAGA
AACTTCTTTAGGGATAGAAGAAAGAGAAAATTTACTAGATCAATTAGGTCGGGTTGTAGAAGCTTTGCAAGCTAATGTTG
GAGTTCAGGTAACAGCAAATGGAGAACAATTAATATTAGTGGATGAAGTTGGTTCTGCCATTCGTGGTGAAACGTTAACT
GCACTAATGGTAAATCTAATGTTAACAGCTCATCCACGGGGTACAGTGGTAGTACCAATTAATGCTTCTGCTGCAGTAGA
ACAAATTGCTCATCGTCATGATAGTCATGTGATTCGGACAAAAGCTAATCCTACAGCATTAATGAAAGCTTGCCAAATTA
ATCATAATGTGGTGCTAGGAGGAAGTGGTGATATGGGATTTATTTTCCCAAAGTTACATCCTGGTTTTGATGCTATGTTT
TGCATCGCTAAAGTCATAGAAATGTTAACTATTCAAGAGCGATCGCTAGGACAAATAACTGCAGATATTCCTCCTATTAC
TCATCGCTGTTATACCATACGTTGTCCTTGGAAAGTAAAGGGAGCATTAATGCGGTATTTAGTAGAAACTAACCCACCAG
AAAAGTTAGAATTAACTGATGGAGTAAAGATTATTAATCATCAAGATAACTATTGGGTATTAGTTTTACCTGATGCTGGA
AAACCATTAGTACATATTTATGCAGATAGTAACGATCGAGATTGGGTAGATAAAACCTTAAGAGATTATCGCAACATGAT
ACATGATTTTGTCAACCTATTTATGACCAGAAATCAGTTAGATAACTTATAA

Upstream 100 bases:

>100_bases
TAGGGGATCGTAAAACGTTATTACTTATACAATTGTGTTTTATTCATAAGCTAAATATGACTGCTATAAATATAGAAAAA
AAATTAACAAAGGAGAAATT

Downstream 100 bases:

>100_bases
GTATTCATTAATCAGCTATCAGCTATTAATTAGATTTTTTTTAATCTGTTTAGTAAGGCTAGGGAGTAGGGAATAAGGAA
TTGTTAATAGTTACATTACC

Product: nucleotidyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 843; Mature: 843

Protein sequence:

>843_residues
MRGVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKKHQIREIIATLHYLPDVMREYFQDGSKFGVQMTYSVEE
EQPLGTAGCVKNIAELLDGTFLVISGDTITDFDLSAAIEFHQKHKSKATLVLTRVNNPIEFGVVITDEEQRIKRFLEKPS
TSEVFSDTVNTGTYILEPEILDYLPSNQECDFSKELFPLLLDKNEPIYGYIAEGYWCDVGHLDSYRKAQYDALQHTVKLE
LPYKERSPNLWIGENTYIDPTAKIETPTLIGDNCRIGPRVHIELGSVIGDNVTIGADANVKRPIVWNGTLVGEDTNLRGC
VICRGSRIHRRAQILEGAVVGSLSTVGEEAQISPHVRVWPSKTVESGAILNINLIWGTTAQRNLFGQRGVQGLANIDITP
DFAVKLGAAYGSTLKNGSTVSVSRDQRNISRMVSRSLIAGLMSVGINVINLQSTAIPIARTILPTMNLVGGLHVRLSPDR
SDQILIEIFDYQGINISKVKEKNIEGAYFKEDFRRVQISEIGNMIDRHEVLNAYSKGFENLLNSEAIRYSKSKVVIDYCY
GVSGAVLPQLLTKFGCDAVVLNASLKETSLGIEERENLLDQLGRVVEALQANVGVQVTANGEQLILVDEVGSAIRGETLT
ALMVNLMLTAHPRGTVVVPINASAAVEQIAHRHDSHVIRTKANPTALMKACQINHNVVLGGSGDMGFIFPKLHPGFDAMF
CIAKVIEMLTIQERSLGQITADIPPITHRCYTIRCPWKVKGALMRYLVETNPPEKLELTDGVKIINHQDNYWVLVLPDAG
KPLVHIYADSNDRDWVDKTLRDYRNMIHDFVNLFMTRNQLDNL

Sequences:

>Translated_843_residues
MRGVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKKHQIREIIATLHYLPDVMREYFQDGSKFGVQMTYSVEE
EQPLGTAGCVKNIAELLDGTFLVISGDTITDFDLSAAIEFHQKHKSKATLVLTRVNNPIEFGVVITDEEQRIKRFLEKPS
TSEVFSDTVNTGTYILEPEILDYLPSNQECDFSKELFPLLLDKNEPIYGYIAEGYWCDVGHLDSYRKAQYDALQHTVKLE
LPYKERSPNLWIGENTYIDPTAKIETPTLIGDNCRIGPRVHIELGSVIGDNVTIGADANVKRPIVWNGTLVGEDTNLRGC
VICRGSRIHRRAQILEGAVVGSLSTVGEEAQISPHVRVWPSKTVESGAILNINLIWGTTAQRNLFGQRGVQGLANIDITP
DFAVKLGAAYGSTLKNGSTVSVSRDQRNISRMVSRSLIAGLMSVGINVINLQSTAIPIARTILPTMNLVGGLHVRLSPDR
SDQILIEIFDYQGINISKVKEKNIEGAYFKEDFRRVQISEIGNMIDRHEVLNAYSKGFENLLNSEAIRYSKSKVVIDYCY
GVSGAVLPQLLTKFGCDAVVLNASLKETSLGIEERENLLDQLGRVVEALQANVGVQVTANGEQLILVDEVGSAIRGETLT
ALMVNLMLTAHPRGTVVVPINASAAVEQIAHRHDSHVIRTKANPTALMKACQINHNVVLGGSGDMGFIFPKLHPGFDAMF
CIAKVIEMLTIQERSLGQITADIPPITHRCYTIRCPWKVKGALMRYLVETNPPEKLELTDGVKIINHQDNYWVLVLPDAG
KPLVHIYADSNDRDWVDKTLRDYRNMIHDFVNLFMTRNQLDNL
>Mature_843_residues
MRGVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKKHQIREIIATLHYLPDVMREYFQDGSKFGVQMTYSVEE
EQPLGTAGCVKNIAELLDGTFLVISGDTITDFDLSAAIEFHQKHKSKATLVLTRVNNPIEFGVVITDEEQRIKRFLEKPS
TSEVFSDTVNTGTYILEPEILDYLPSNQECDFSKELFPLLLDKNEPIYGYIAEGYWCDVGHLDSYRKAQYDALQHTVKLE
LPYKERSPNLWIGENTYIDPTAKIETPTLIGDNCRIGPRVHIELGSVIGDNVTIGADANVKRPIVWNGTLVGEDTNLRGC
VICRGSRIHRRAQILEGAVVGSLSTVGEEAQISPHVRVWPSKTVESGAILNINLIWGTTAQRNLFGQRGVQGLANIDITP
DFAVKLGAAYGSTLKNGSTVSVSRDQRNISRMVSRSLIAGLMSVGINVINLQSTAIPIARTILPTMNLVGGLHVRLSPDR
SDQILIEIFDYQGINISKVKEKNIEGAYFKEDFRRVQISEIGNMIDRHEVLNAYSKGFENLLNSEAIRYSKSKVVIDYCY
GVSGAVLPQLLTKFGCDAVVLNASLKETSLGIEERENLLDQLGRVVEALQANVGVQVTANGEQLILVDEVGSAIRGETLT
ALMVNLMLTAHPRGTVVVPINASAAVEQIAHRHDSHVIRTKANPTALMKACQINHNVVLGGSGDMGFIFPKLHPGFDAMF
CIAKVIEMLTIQERSLGQITADIPPITHRCYTIRCPWKVKGALMRYLVETNPPEKLELTDGVKIINHQDNYWVLVLPDAG
KPLVHIYADSNDRDWVDKTLRDYRNMIHDFVNLFMTRNQLDNL

Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family [H]

Homologues:

Organism=Homo sapiens, GI11761621, Length=354, Percent_Identity=32.4858757062147, Blast_Score=172, Evalue=2e-42,
Organism=Homo sapiens, GI11761619, Length=354, Percent_Identity=32.4858757062147, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI31881779, Length=368, Percent_Identity=26.6304347826087, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI45447090, Length=368, Percent_Identity=26.6304347826087, Blast_Score=122, Evalue=1e-27,
Organism=Escherichia coli, GI1790224, Length=189, Percent_Identity=31.2169312169312, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI1789837, Length=394, Percent_Identity=26.3959390862944, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1788351, Length=184, Percent_Identity=30.4347826086957, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI133931050, Length=382, Percent_Identity=30.3664921465969, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17509979, Length=389, Percent_Identity=26.4781491002571, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17509981, Length=373, Percent_Identity=26.0053619302949, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6320148, Length=334, Percent_Identity=37.125748502994, Blast_Score=187, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6320417, Length=431, Percent_Identity=21.1136890951276, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355443, Length=367, Percent_Identity=33.5149863760218, Blast_Score=182, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24644084, Length=367, Percent_Identity=33.5149863760218, Blast_Score=182, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24653912, Length=391, Percent_Identity=23.5294117647059, Blast_Score=89, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841 [H]

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]

EC number: =5.4.2.10 [H]

Molecular weight: Translated: 93631; Mature: 93631

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00101 HEXAPEP_TRANSFERASES ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKKHQIREIIATLHYLPDVM
CCCEEEECCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REYFQDGSKFGVQMTYSVEEEQPLGTAGCVKNIAELLDGTFLVISGDTITDFDLSAAIEF
HHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCEEECCCHHHHHHH
HQKHKSKATLVLTRVNNPIEFGVVITDEEQRIKRFLEKPSTSEVFSDTVNTGTYILEPEI
HHHCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCCEEEECCHH
LDYLPSNQECDFSKELFPLLLDKNEPIYGYIAEGYWCDVGHLDSYRKAQYDALQHTVKLE
HHHCCCCCCCCCHHHHHHHEECCCCCEEEEEECCEEECCCCCCHHHHHHHHHHCEEEEEE
LPYKERSPNLWIGENTYIDPTAKIETPTLIGDNCRIGPRVHIELGSVIGDNVTIGADANV
ECCCCCCCCEEECCCCEECCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCEEECCCCCC
KRPIVWNGTLVGEDTNLRGCVICRGSRIHRRAQILEGAVVGSLSTVGEEAQISPHVRVWP
CCCEEECCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECC
SKTVESGAILNINLIWGTTAQRNLFGQRGVQGLANIDITPDFAVKLGAAYGSTLKNGSTV
CCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHHCCCCCCCCEE
SVSRDQRNISRMVSRSLIAGLMSVGINVINLQSTAIPIARTILPTMNLVGGLHVRLSPDR
EEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCC
SDQILIEIFDYQGINISKVKEKNIEGAYFKEDFRRVQISEIGNMIDRHEVLNAYSKGFEN
CCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHH
LLNSEAIRYSKSKVVIDYCYGVSGAVLPQLLTKFGCDAVVLNASLKETSLGIEERENLLD
HHCHHHHEECCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHH
QLGRVVEALQANVGVQVTANGEQLILVDEVGSAIRGETLTALMVNLMLTAHPRGTVVVPI
HHHHHHHHHHCCCCEEEEECCCEEEEECCCCCHHCCHHHHHHHHHHHHEECCCCEEEEEE
NASAAVEQIAHRHDSHVIRTKANPTALMKACQINHNVVLGGSGDMGFIFPKLHPGFDAMF
CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHH
CIAKVIEMLTIQERSLGQITADIPPITHRCYTIRCPWKVKGALMRYLVETNPPEKLELTD
HHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECC
GVKIINHQDNYWVLVLPDAGKPLVHIYADSNDRDWVDKTLRDYRNMIHDFVNLFMTRNQL
CEEEEECCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNL
CCC
>Mature Secondary Structure
MRGVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKKHQIREIIATLHYLPDVM
CCCEEEECCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REYFQDGSKFGVQMTYSVEEEQPLGTAGCVKNIAELLDGTFLVISGDTITDFDLSAAIEF
HHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCEEECCCHHHHHHH
HQKHKSKATLVLTRVNNPIEFGVVITDEEQRIKRFLEKPSTSEVFSDTVNTGTYILEPEI
HHHCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCCEEEECCHH
LDYLPSNQECDFSKELFPLLLDKNEPIYGYIAEGYWCDVGHLDSYRKAQYDALQHTVKLE
HHHCCCCCCCCCHHHHHHHEECCCCCEEEEEECCEEECCCCCCHHHHHHHHHHCEEEEEE
LPYKERSPNLWIGENTYIDPTAKIETPTLIGDNCRIGPRVHIELGSVIGDNVTIGADANV
ECCCCCCCCEEECCCCEECCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCEEECCCCCC
KRPIVWNGTLVGEDTNLRGCVICRGSRIHRRAQILEGAVVGSLSTVGEEAQISPHVRVWP
CCCEEECCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECC
SKTVESGAILNINLIWGTTAQRNLFGQRGVQGLANIDITPDFAVKLGAAYGSTLKNGSTV
CCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHHCCCCCCCCEE
SVSRDQRNISRMVSRSLIAGLMSVGINVINLQSTAIPIARTILPTMNLVGGLHVRLSPDR
EEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCC
SDQILIEIFDYQGINISKVKEKNIEGAYFKEDFRRVQISEIGNMIDRHEVLNAYSKGFEN
CCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHH
LLNSEAIRYSKSKVVIDYCYGVSGAVLPQLLTKFGCDAVVLNASLKETSLGIEERENLLD
HHCHHHHEECCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHH
QLGRVVEALQANVGVQVTANGEQLILVDEVGSAIRGETLTALMVNLMLTAHPRGTVVVPI
HHHHHHHHHHCCCCEEEEECCCEEEEECCCCCHHCCHHHHHHHHHHHHEECCCCEEEEEE
NASAAVEQIAHRHDSHVIRTKANPTALMKACQINHNVVLGGSGDMGFIFPKLHPGFDAMF
CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHH
CIAKVIEMLTIQERSLGQITADIPPITHRCYTIRCPWKVKGALMRYLVETNPPEKLELTD
HHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECC
GVKIINHQDNYWVLVLPDAGKPLVHIYADSNDRDWVDKTLRDYRNMIHDFVNLFMTRNQL
CEEEEECCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]